Parabacteroides sp. CT06: CI960_18625
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Entry
CI960_18625 CDS
T05011
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_18625
Transporters [BR:
parc02000
]
Other transporters
Pores ion channels [TC:
1
]
CI960_18625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
STN
CarboxypepD_reg
CooC_C
TTR_TEN1-4
FecR_C
Big_1
Motif
Other DBs
NCBI-ProteinID:
AST55213
UniProt:
A0A223HRX9
LinkDB
All DBs
Position
complement(4195283..4198543)
Genome browser
AA seq
1086 aa
AA seq
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MMNNLYFQLDGDKSAFVRLVSKISRIMKLTLFLVCLSISMSFAMTTNAQSTSLSFKATDQ
SIKEVLELIESQTDFHFFYNSKLVDINQVISVDIKDKDVFTTLDHIFKNSNIRYKIVGKD
VILSVKGSKSDQDEKTVTGTVVDEAGEPIIGANIVEKGKANGTMSDLNGHFSIVVSSDAV
LQISYIGFSLHEEAVKNKNVLQVIMKEDTQKLDEVVVVGYGSVDKKELTSAVTAVSSKDF
LQGAFTSPLSMIDGKVSGVNVSNAAAADPNSSPNIQMRGASSIEAGNSPLVIIDGMPGAD
LRSVANQDIESITILKDGSAAAIYGSRAANGVILVQTKKGKAGKVSISYDGYIDHDMVAN
QPKVLSVDEFLAHERDVDFGHRVDWYDKLLNKSNLGQSHYLAVSGGSENLTFRASANYKK
KDGLDIASSRKEYGVRMGFTAKTLEGLLEIQGNLSTRVINEEYVDYGVFQQAVKLNPTHP
LMDEKDPSKYSTLYGFDTYNPVGWLKDKEDGGDRQFSLADFKMKLNILPTLNTELSLARQ
GQEYFKRIYVNSNHKESIDNMRSGRGTLQEENYTDYTLEWIGNYFTTIDKHTIKLMAGYS
YQEFNHRSFSSENANFPSDAMSYNNLEAGDWNMAAGRLGVSSLKEKEKTIGFPARLIYNY
DDTYYLTASVRYEGNSKFGANHKWGWFPAASAAWRMSSLPAIKNIEAINDLKLRFSYGVT
GRSGFPKYSALARYEQGGYWLDDNGQWTQAWGPTNNPNPDLHWEKQISYNLGVDFSLLKN
KLSGSLDAYVKQGKEVISNYDAPLPPFMFDQIFTNVASTSSKGLELTLNWDVVNMKDFSY
STNLVASFTKSKLDKFSNGTYQKGYMDRYLLPAPGNPGYAQRLQDGVEIGSFYGLRYAGV
DDNGNMLVWKDAKIGGEKILANGEASDTDKDYIGHGTPRYSLSWGNTFRYKGFDLSLYFQ
GRFDYQILNMYQMYYGLVAEPGMNLLEDAYGKNGHIKSGKVMCDYFLEDGDYFRLDNITL
GWTPKLDTKWISNLRVYATVKNAFTITKYSVMDPTSVDINGLEPGISGLNVYPIARSFTF
GIQISY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataatttatatttccaacttgatggagataaatcagcgtttgtcaggttggta
tctaaaatatcaagaattatgaagttgaccttatttcttgtatgtttatcaattagtatg
tcatttgctatgacaacaaatgctcaaagcacctcactttcttttaaagcgacagatcaa
tctataaaagaagttttggaactgattgaaagtcaaaccgattttcacttcttttataat
agtaaattagttgatatcaatcaagtaatatctgttgatataaaggataaagacgtgttc
actacattagatcatatatttaagaattcgaatatacgatataaaatagtaggaaaagat
gtgattctatcagtaaaaggcagtaagtctgatcaagatgaaaagacagtaacaggtact
gttgttgatgaggcgggggagcctattattggtgcaaatattgtagagaagggtaaagca
aatggaactatgtctgatttgaatggtcatttctctattgtagtgtcttccgatgcggta
ctccagatttcttatattggattttctcttcatgaagaagccgtgaaaaataaaaatgta
cttcaggtcattatgaaagaggatacacaaaaattagatgaggttgttgttgttggttat
ggctcagttgacaaaaaagagttgacttctgctgtaaccgctgtttctagtaaagacttt
ttacaaggagcatttacaagtccgttgtcaatgatcgatggaaaagtatcaggcgttaat
gtctcgaatgcggcagcggcagatcctaactcttctcctaatatccagatgcgaggtgct
tcttccatagaggcagggaattcgccattggttattatagacggaatgccgggtgcagat
ttaagaagtgtcgctaaccaagatattgaatcaattacaatattgaaagatggttcggct
gcagcgatttatggttcacgtgcggcgaatggagttattttggtgcaaacaaaaaaggga
aaggctggaaaagtttctatatcttatgatggctatatcgatcatgatatggtagctaat
caaccaaaagtactttctgtagatgagtttcttgcgcatgaaagagatgtagattttggt
catcgggtggattggtatgacaaattgttgaataagagtaatctgggtcaaagtcattat
ttagctgtttcaggaggaagtgaaaatttgacctttagagcttctgccaattataagaag
aaagatggcttggatatagcgtcttctagaaaagagtatggagttagaatgggattcacc
gcaaagacattagaaggtctgttagagattcaaggaaacttgtccacgcgagttatcaat
gaggaatatgtggattatggcgtatttcagcaagcggtaaaattgaatccgactcatcca
ttgatggatgaaaaagatccttctaaatatagtactctgtatgggtttgatacctataat
cctgtaggatggttgaaagacaaggaggatggaggtgatagacagttttcccttgctgat
tttaaaatgaaactaaatattttaccgacgctaaatactgaattatctctagctagacag
gggcaagagtattttaagcgtatatatgttaattcaaatcataaggaatctatagataat
atgcgttccggacgaggaactctgcaggaagaaaattatacggattatacattggaatgg
atcggtaattattttacgacaattgacaagcatacaattaaattaatggctggatattcg
tatcaagagtttaatcatcgtagtttttcttcagagaatgcaaattttccttcggatgcg
atgtcctataacaatctggaagctggagattggaatatggcagcaggtcgtttaggggta
tcttcgttgaaagaaaaagaaaagacaataggttttcctgcgcgattgatttataactat
gatgatacttactatttgacggcttctgttagatatgaaggaaatagtaaatttggggca
aatcataaatggggatggttccctgcagcctctgcagcatggcgaatgtcaagtttgcct
gctattaaaaatattgaggccatcaatgatttaaaactccgtttttcatatggagttaca
ggacgctctggtttcccaaagtattcagcgttggctcgttatgagcaaggtgggtattgg
ctagacgataatggacaatggacccaagcgtggggacctacgaataatcctaatcctgat
ttacattgggaaaagcagatatcttataacttgggtgtggatttttctcttttaaagaat
aagttatcaggtagtttggatgcctatgtaaaacaaggtaaagaagtaatttctaattat
gacgctccactacccccttttatgtttgatcagatatttacaaatgtagcttctactagt
tcaaaaggtttggaactgactttaaattgggatgttgtaaacatgaaagattttagttat
tcgactaatctagttgcttcttttacgaaatctaaactggataaattctcgaatggtaca
tatcagaaaggatatatggatcgatatttactgccagctcccggaaatcccggctatgcc
caacgcttacaagacggagtggaaattggttctttttatggcttaagatatgcgggagtt
gatgataatggcaatatgttggtttggaaagacgctaaaattggaggagaaaaaatactc
gctaatggtgaagctagtgatacagacaaagattatattggccatggaacacctagatat
tctttgtcttgggggaatacatttcgatataaaggatttgatttaagtctatatttccaa
gggcgctttgactatcaaatattgaatatgtatcaaatgtattatggattagttgctgaa
ccgggtatgaatttattggaagatgcttatggaaagaatgggcatattaagtctggaaaa
gtgatgtgtgattattttttggaggatggagattattttaggttggataacataacttta
ggatggactccaaaattagatacaaagtggattagcaatttacgggtatatgcgacagtt
aaaaatgcgtttactattacgaaatattcagtaatggatccgacatctgtggatataaat
ggtctagaaccaggtattagcggtctaaatgtgtatcctattgccagatcattcacattt
ggaattcaaatttcatattaa
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