Parabacteroides sp. CT06: CI960_19055
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Entry
CI960_19055 CDS
T05011
Name
(GenBank) ATP-dependent helicase
Organism
parc
Parabacteroides sp. CT06
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Cas_Cas4
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AST55295
UniProt:
A0A223HS82
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Position
complement(4309729..4312896)
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AA seq
1055 aa
AA seq
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MLTIYRASAGAGKTHKLTGEYLMLLFSQPGAYRRILAVTFTNKATDEMKTRIVQELYHLA
SGRASDYIQLLSSAYSLTERQVREQARKILVAILHDYSAFNISTIDRFFQQTMRAFTREI
GLQGGYGIEMDQELVLTEAIDNLLADLEKPESKDLLGWLLHFAEDKIEDGGGWSLRQDIM
SLSREVFKESYKAFSEEVGKDIADKQALDAYKNELYAIIRSVEAEARRLGEEGVALLKQF
ALQPSDFKGGSRSPFFYFEKLARGEMKEPTATFQTLPDNPDAYTTKTTPPGLRQIIGCVY
EEGLNTCVKNIVSLFANLTAYNTAREIVRYYYTLGILTDISRQIASYREEKNVMLIADTT
ELLNKVISGSDAPFIYEKTGTHVDHYMIDEFQDTSGMQWNNFRPLVEESLANGRANLIVG
DVKQSIYRFRNSDWKLLDEQVRRDFEEEQVREETLMDNWRSCRHIVEFNNAFFTAAPAIL
QDLYNEALKNSSLSEEERTAFFTKIMTAYDKSSQRVPPPFQKKDGHVRIDFLSGDEEKKW
EQEAMERLPATLERLQDNGYALKDIAILVRTNQEGALVADTLLAYKEEHPSDRYNYDIIS
DDALFVGSSPAVRFLIAVLRYLRNPEDRMNKKLAMYAYQVLTGKFGESEADESVFQNLQS
ISRQSLYEVTEGLFRNFSAYFPETEQVFVQAFLDMVSEYAQKESADLNRFLRWWDETGYR
KTIATPDGQNAIRILTVHKSKGLGFKVVIIPFGDWEIDHKPTKPVILWCHPEKKPFDRLH
LVPVRYGQILSSTIFAKDYFKERLHAFIDNLNTLYVAFTRSKEELIVFSPRPRKINKEGK
VEKITSIADLLWAGVETDIEDDTFERGEWWHPASGRTAEDTLEEIPMSRLYSVSPDDRLQ
LRLHGKGFFFDNARRKHGTLMHEVLSRIRTPKDIPASVESYRLAGVINREEAAELISRLE
ELLQAEEVKAWYDGSARVLNEVDILFGKGLSKRPDRVMIKDNKVIVVDYKFGERQDKRHP
NQVRNYLQLIRKMGFERVDGYLWYVELGKIEAVNK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaatttatagggcttccgccggggcgggcaagacgcataagctgacaggggag
tacctgatgttgctcttctcccagccgggcgcttatcgccggatcttggccgtgacgttt
acgaataaggcgacggatgagatgaaaacccgtatcgttcaagaactttatcacctcgct
tccggccgtgcgtccgattatatccagctactctcttccgcctattccttgacggagcgg
caggtgagggagcaggcccggaagattctggtcgctatcctgcacgattactccgctttt
aatatcagtacgatcgaccgctttttccagcaaacgatgcgtgcctttacccgcgagatc
ggtttgcaaggcggttatggcatcgagatggaccaagaactggtcttgaccgaggcgatc
gataacctgctggccgatctggagaagccggagagcaaggatttgctaggttggctgctg
catttcgccgaggacaagatcgaggatggaggcggctggagtttgcggcaagacatcatg
tcgctcagccgggaggtctttaaggagagttataaggcatttagcgaggaagtaggtaag
gatatcgcggataagcaggcgctcgatgcctataagaatgagctatacgccatcatccgc
tccgtagaggcggaggcgagacgtttaggagaggagggagtggcgttgctgaaacagttt
gcgttacaaccctcggattttaaggggggaagccgttccccgtttttctatttcgagaag
ctggcgagaggtgagatgaaagagccgactgccacattccaaactttgccggataatccg
gatgcctatacgaccaagactactccaccgggtctccggcagatcatcgggtgtgtatat
gaggaagggttgaatacctgcgtaaagaatatcgtatccctgttcgccaacctgacggcc
tataacacggcccgggagatcgtgcgttattattatacgttagggatcttaaccgatatc
tcccggcaaatcgcctcttaccgggaagaaaagaatgtgatgctgatcgccgatacgacc
gagttgctgaataaggtcatcagtggcagcgacgccccctttatctacgagaagacgggt
acgcacgtagatcattatatgatcgatgagttccaagataccagcggcatgcagtggaat
aatttccggcccttggtggaggagagtctggcgaatggtagggcgaacttgatcgttggc
gatgtgaagcaaagtatttatcgtttccgtaactcggattggaagctattggacgagcaa
gtccgcagggatttcgaggaggaacaggtccgtgaggaaaccctgatggataattggcga
agctgccgccatatcgtggagtttaataacgcgttcttcaccgccgctccggcgatcctg
caggatctatataatgaggcgttgaaaaactcctcattaagcgaggaagaacgcacggcc
tttttcacgaagatcatgaccgcttatgataagagttcccagcgtgtccctccccctttc
cagaagaaggacggacatgtacggatcgatttcttgtccggcgatgaggagaagaagtgg
gagcaagaggcgatggagcgattgccggctaccttggagcgcttgcaggataacggttat
gcgctaaaagacatcgccatactcgtgcgtaccaatcaagaaggcgctttagtggctgat
acgttgctagcctataaggaagagcatccgtccgaccggtacaattacgatatcatctcc
gatgatgccctgttcgtgggtagttctccggcggtccgtttcctgatcgccgtattgcgc
tatttgcgaaatccggaggaccggatgaacaagaaattggcgatgtatgcctatcaagta
ttaaccggaaaattcggggagagcgaggcggatgagtctgttttccaaaaccttcagtct
atttcccggcaatccttgtacgaggtaaccgaagggctcttccgtaacttctccgcttac
ttcccggaaacggaacaggtattcgtgcaagcctttctggatatggtttccgagtacgcc
caaaaagaaagcgcggatttgaaccgtttcttgagatggtgggacgagaccggttatcga
aagacgatcgctaccccggatgggcaaaacgctatccgcatcttgaccgtacataaatcc
aagggcttaggttttaaggtcgttatcattcctttcggggactgggagatcgaccataag
ccgacaaagcccgttatcctttggtgccacccggagaagaagccgtttgaccgcctgcac
ttagttcctgtccgttacggacagatcctgagtagcacgattttcgccaaggattatttc
aaggagcgcttgcatgctttcatcgataacttgaacaccttatacgtcgcttttacccgt
tcgaaagaagaactgatcgtattctccccccgtccgaggaagatcaacaaggaaggtaag
gttgagaagataacttccatcgccgatctattgtgggcgggggtggagacggatatcgag
gatgatacctttgaaaggggcgaatggtggcatccagcttcgggtagaacggcagaagat
accctggaggaaatccccatgagccgcctgtattccgtttccccggatgatcgtttacaa
ttacgcctgcatgggaaaggattctttttcgataatgccaggcggaagcacggtaccttg
atgcatgaggtattgagccggatacgtacgccgaaagatattcccgcttcggtcgaaagt
tatcggttagccggggtgattaaccgggaggaagcggcggagttgatcagccgtctggaa
gaattattgcaagcggaggaggtaaaggcttggtatgatggttccgcccgtgtcttgaat
gaagtggatatcctgttcggtaaaggcttgtctaaacgtccggaccgggtgatgataaaa
gataacaaggtaattgtcgtggattataaatttggcgaacggcaagataagcgccatcct
aatcaggtaagaaattacctgcaattaattcgtaaaatgggtttcgagcgggtcgatgga
tacctttggtacgtagagttaggcaaaatagaggcagtgaataagtga
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