Parabacteroides sp. CT06: CI960_20035
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Entry
CI960_20035 CDS
T05011
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
parc
Parabacteroides sp. CT06
Pathway
parc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CI960_20035 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parc03019
]
CI960_20035 (pnp)
03016 Transfer RNA biogenesis [BR:
parc03016
]
CI960_20035 (pnp)
Enzymes [BR:
parc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CI960_20035 (pnp)
Messenger RNA biogenesis [BR:
parc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CI960_20035 (pnp)
Transfer RNA biogenesis [BR:
parc03016
]
Prokaryotic type
tRNA degradation factors
CI960_20035 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
DUF7071
RNase_II_C_S1
GET4
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AST55469
UniProt:
A0A223HSQ5
LinkDB
All DBs
Position
4559040..4561280
Genome browser
AA seq
746 aa
AA seq
DB search
MLNPINKTIELGDGRTITIETGKLAKQADGAVTVRMNNTVLLATVCAAKDANPGVDFMPL
QVEYKEKYSAFGRFPGGFTKREGKASDYEILTSRLVDRALRPLFPDNYHAEVYVNIILFS
ADGEDLPDALAGLAASAALAVSDIPFNGPISEVRVARTDGKYIVNPTSAELEKADIDIMV
AATIDNIMMVEGEMNEVQESEMLEAIKVAHEAIKVQCKAQLELSEACGKLVKREYCHEVN
DDELRKDVHDKCYAKAYAVATSGSGKHERSEAFEKIVEEYKAQFSEEELTDEKLEMIGRY
YHDVEKEAMRRAILDEGKRLDGRKTTEIRPIWIETDCLPGPHGSAIFTRGETQSLSTVTL
GTKSDEKMIDDVLNHGYERFLLHYNFPPFSTGEAKATRGVGRREIGHGNLAHRALKRMIP
DNYPYVVRVISDILESNGSSSMATVCAGTLALRDAGVPMKKPVSGIAMGLISENKGTNYA
ILSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILENALAQAKEGRMHILGK
ILEAQPEAREDLKPHAPRIETMIIGKEFIGAVIGPGGKIIQGIQEKTGATVSIDEVDGVG
KIEISGTNKATIDAAVKAIKAIVAVPEIGEVYEGKISSIMPYGAFVEFMPGKDGLLHISE
IDWKRLETVEQAGLKEGDTVSVKLVDIDPKTGKFKLSRKVLLPKPEGYEERPPRPERGER
GPRQDRGDRGPRQDRGDRGPRREYRD
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatccaattaacaagacgatcgagttaggtgatggaagaaccattaccatcgaa
accgggaaattggccaaacaggcggacggagcggttaccgttcgtatgaacaacaccgtg
ttgctcgccactgtttgtgccgctaaagacgcgaacccgggtgttgacttcatgccgttg
caagtagaatacaaagagaaatactccgcttttggacgtttccccggaggttttacaaaa
agagaaggaaaagcttctgattatgaaatcctcacatctcgtttagtagaccgcgcgttg
cgtcctcttttcccagacaactaccacgctgaggtatatgtaaatattatattgttctcc
gctgatggcgaagatttgccggacgcattagcaggtttggccgcttccgccgctttggca
gtttctgatattccttttaacggaccgatctctgaggttcgcgtagctcgtacggatgga
aaatacatcgtcaacccaacttccgcggaattggagaaagctgatatcgacatcatggtt
gccgctaccatagacaacatcatgatggttgagggtgagatgaacgaggttcaggaatct
gagatgcttgaggctatcaaggtcgctcacgaggctatcaaggtacaatgcaaggctcaa
ttggaattatccgaggcttgcggcaaattggtaaaacgtgaatattgccacgaggtaaac
gatgacgagttgcgcaaggacgtacacgacaaatgttacgccaaggcttacgccgtagcc
acatccggtagcggcaagcacgaacgcagcgaggcattcgagaaaatcgtcgaggaatac
aaggctcaattctccgaggaggagttgacggacgagaaactggaaatgatcggtcgctac
tatcacgatgtagagaaagaggctatgcgccgtgccatccttgatgagggtaagcgtttg
gatggtcgtaagactaccgagatccgtccgatctggatcgagacagattgcctgccgggt
cctcacggttccgctatctttacacgtggagagacacagtctttatctacggtaacttta
ggtacgaagtctgatgagaaaatgatagacgacgtattgaaccatggatacgagcgtttc
cttttacattataacttccccccgttctccacaggcgaggccaaagcaacacgtggcgta
ggccgtcgtgagatcggacacggtaacttggctcaccgtgcgctaaaacgtatgatcccg
gataactatccgtatgtagtacgtgtgatttccgatatcttggagtctaacggttcttct
tctatggctacggtttgtgccggtaccttggcgttgagagacgcgggtgtcccgatgaag
aaaccggtatccggtatcgctatgggattgatctccgagaacaagggtacgaactacgcc
atcttgtctgatatcttaggcgacgaggatcacttgggtgatatggacttcaaggtaacg
ggtacgaaagacggtatcacggctacccagatggatatcaaggtagacggtttgtcttac
gagatccttgagaatgctttggctcaagctaaagagggtcgtatgcatatcttgggcaag
atattggaggctcaaccggaagctcgtgaggatttgaaacctcatgcacctcgtatcgag
acgatgattatcggtaaggaattcatcggtgcggtaatcggcccgggcggtaagatcatc
caaggtatccaagagaaaacgggagctacggtatctatcgatgaggtagacggcgtagga
aagatcgagatctccggcacgaataaggctacgatcgacgcggctgtcaaggcgatcaag
gctatcgtcgctgttcctgagatcggagaggtttatgaaggaaagatttcctctatcatg
ccttatggtgcattcgttgagttcatgccgggtaaggatggtttgcttcacatttccgag
atcgattggaaacgtctggagaccgttgagcaagccggcttgaaggaaggcgatacggtt
tctgtcaagttggttgatatcgatccgaaaacaggcaagttcaaactttcccgcaaggta
ttgcttccgaaaccggaaggttacgaggaacgtccgccaagaccagaaagaggtgagcgt
ggacctcgccaagatcgtggagaccgtggtcctcgtcaggatcgtggtgatcgcggacct
cgcagggagtacagagactaa
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