Parabacteroides sp. CT06: CI960_20390
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Entry
CI960_20390 CDS
T05011
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CI960_20390 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parc03019
]
CI960_20390 (rnc)
03009 Ribosome biogenesis [BR:
parc03009
]
CI960_20390 (rnc)
03036 Chromosome and associated proteins [BR:
parc03036
]
CI960_20390 (rnc)
Enzymes [BR:
parc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CI960_20390 (rnc)
Messenger RNA biogenesis [BR:
parc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CI960_20390 (rnc)
Ribosome biogenesis [BR:
parc03009
]
Eukaryotic type
90S particles
RNase
CI960_20390 (rnc)
Prokaryotic type
rRNA processing factors
CI960_20390 (rnc)
Chromosome and associated proteins [BR:
parc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CI960_20390 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AST55535
LinkDB
All DBs
Position
4652345..4653187
Genome browser
AA seq
280 aa
AA seq
DB search
MFRKLYKQLHKRIRLLHNKGREPYLSLSKILGFYPDNLQIYEQALLHKSSSVETGDGKWL
NNERLEFLGDGILDAAVADIVYKRYPNKREGFLTNTRSKIVQRETMNKVAVQLGLDQMVV
YSTKINSHNNHMYGNALEALIGAIYLDQGYDVCYKFIRDVMIEKYIDVDTLVRKEINFKS
NLIEWSQKNKISISFDLIESFTDHDGNPVFQSAIKLLGEQIGIGIGYSKKESQQAASKMA
VKRLRTDKELQQRISATKKKKTGELTDEKEFSDLPEEETV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgtttagaaagctatacaaacagctacataaaagaataaggctcctgcataataaaggt
agggagccttatttgtctttatcaaagattctaggtttttatccggataatctccagatt
tacgagcaggccttgttgcataaatcatcatcagtagagacgggtgatggtaaatggctt
aacaatgagcgtcttgaatttttaggagatggcattttggatgcggcggtcgccgatatt
gtctataagcgctacccgaataagcgggaaggctttttgacaaacacacgctccaagatc
gtacaacgggaaacgatgaataaggtcgccgtacaactcggcctcgatcaaatggtagtc
tattcaaccaagataaactctcataacaatcatatgtatggtaatgcgctcgaggctttg
atcggcgctatttatctggatcaaggttatgacgtttgttataagtttatccgtgacgtg
atgatagaaaagtatatcgatgtagatacactcgtccggaaagagataaatttcaagtca
aacttgattgaatggagccaaaagaacaaaatatcgatctcgttcgatctaatagagtct
tttacagatcatgatggaaatcctgtattccaaagcgcgattaaattgctcggcgagcaa
attggcataggtatcggttactccaaaaaagaatcccagcaagcggcttctaaaatggcg
gtcaaaagattgcggacagacaaagaactccagcaacgtatctctgccacaaagaaaaag
aagactggtgaactaaccgatgaaaaagagttttctgacctcccagaggaagaaactgta
tga
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