Parabacteroides sp. CT06: CI960_20600
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Entry
CI960_20600 CDS
T05011
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_20600
Transporters [BR:
parc02000
]
Other transporters
Pores ion channels [TC:
1
]
CI960_20600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
STN
FecR_C
Invasin_D3
CooC_C
Big_1
DUF3012
Motif
Other DBs
NCBI-ProteinID:
AST55569
UniProt:
A0A223HT06
LinkDB
All DBs
Position
4699591..4702734
Genome browser
AA seq
1047 aa
AA seq
DB search
MSFILLFLTLFQAVATNSYSQSVTISVKTDQAPLTDLFAIIEKQSDFLFFYVDSDVKNVK
VSVNATDKSIENILSQALRNTSLKYSIEGRNINVFNKNIVAQQTKKRITGVVKDPEGNAI
IGANVVEKGTTNGTITDLDGKYVMEVSSNATLEFSYIGYMTQLQPVGGKNEINVNLKEDT
QKLDEVVVVGYGTQTKREITGSITNVTAEDFNQGLTRNAADLLQGKVAGLTINTGSGDVT
GNSTIQLRGLSTLQNDQGPLIVIDNVPGMDMSTVNPQDIESISILKDASSAAIYGSRSAG
GVILITTKKGYASKPTIAYNGAFGVSTLANKPNLLTADQWRSYTSSTPGKDGKDFDMGAN
TDWFDEITRIGFQQDHAVSLSGGGSHHNYRGSLSYMQREGIARDNSMNRYNARFQFSQRA
LEDRLKVSITGVATVTDNAPTNATNFLLAYNMIPVRPVKLEDGSWFDTREYDQGNPVRNQ
KENTHKNRINNFYGTADVGYTIIDGLEAKVLLAKSRNTEDESKYNSIESQAGYNDGGKAE
RWSRLRDKDLMEWTANYSAEFNKHKINALIGYSWEEENYEETHVQTRGFVTDLLGANNLA
AGQNLNPGDAESQKWQSRLISLYARANYSFNEKYMLTATVRRDGSSKFGTNNKWGTFPSV
SVGWNITQESFMEKVNWLNDLKLSVGYGITGNQTGLDPYKTLELYGTDGVYYDTGSWLPS
YKISQNANPDLKWEQTAMLNIGLDFSVLDSRLGGRIEWYNKKTSDMLYTYPVPTPPYLYS
EIMANVGDMRNTGIELSLNADAIRTKDFDWNISLNLAHNENEVTRLSNDVFTMDKILLGD
VFIRGGSSSGTHVLEEGRPIGQFYGLVCNGIDENGRYIMVDKDGDGEISDPADYDYIGSA
QPKLTYGITNTFRYKNFDLSFFLRGTIGNDILNATRMAYAQSGFLPGTNALDDPLTYTLS
ETPRFSNYYLEKGSFMRLDNLTLGYKIKALNGIRVYFTAQNLFVITKYKGLDPEVPMDSG
DGLTPGVEPREFYPKARTFSVGLNLNF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttattttacttttcttgacactgttccaagcggtagcgactaattcctattca
caatctgtaacgatttccgtgaagacggatcaagccccgctaaccgatctattcgctatt
atagaaaaacaaagcgatttcttattcttctatgtggattctgacgtaaagaacgtaaaa
gtgagcgtgaacgcaaccgataagtccatagaaaatatcttatcgcaagcactacgcaac
acgagtttgaaatattcgatcgaaggacgaaatatcaatgtatttaataaaaacattgtt
gcccaacagactaagaaacgcatcaccggtgtcgttaaagacccagaaggaaacgctatt
atcggtgctaacgtagtcgagaaaggcacgaccaacggcacgattacagatctggatggt
aaatacgttatggaagtatcctcaaacgcaactctcgagttctcttatatcggttacatg
acacagttgcaaccggtaggcggcaaaaacgagatcaatgtaaacttgaaagaggacact
caaaaactggatgaggtagtcgtagtgggttacggtacgcagacgaaacgtgagattacc
ggttctatcaccaacgtgaccgctgaggatttcaaccaaggtctgactcgtaacgcagcg
gatttgttacaaggtaaggtggccggtttaacgatcaatacgggttccggcgacgtaacg
ggcaactcgacgattcaattaagaggtctatccactttgcaaaacgaccaaggcccgtta
atcgttatcgataacgtgccgggcatggacatgtctacggttaatccgcaggacatcgaa
tctatctctatcttgaaagatgcctcttcagccgctatctacggttcccgttcagcgggt
ggtgttatccttatcacgactaagaaaggttacgccagcaaaccgaccatcgcttataat
ggagcgttcggtgtatctaccttggctaacaagccgaatctgctaacagcggaccaatgg
cgtagctatacttcctctaccccgggtaaggacggtaaggattttgacatgggagcgaac
acggattggttcgacgagatcacgagaatcggtttccaacaggatcatgccgtgtcttta
tcaggaggtggttcacaccataactatagaggttccctttcttatatgcaacgtgaaggt
atcgcacgcgataactccatgaaccgttacaacgcccgtttccaattctcccaacgtgct
ctagaggatcgtttgaaagtaagcatcaccggcgtggctaccgttacagataacgcgccg
accaatgcgaccaatttcttacttgcctacaatatgattcccgttcgcccggttaagcta
gaggatggatcttggttcgacacacgtgaatacgaccaaggaaacccggtacgtaaccag
aaagagaatacacataagaaccgcatcaataatttctatggaaccgctgatgtcggttat
acgattatcgatggcttagaggctaaagttcttttagctaaaagccggaatacggaagat
gagagcaaatacaacagtatcgagtctcaagccggttacaacgatggcggtaaggccgaa
cgttggtccagactacgtgataaagacttgatggaatggaccgccaattattcagctgag
ttcaataagcataagatcaatgccttgatcggttactcttgggaagaagagaattatgag
gagactcacgtacagacccgtggtttcgtcactgatttattaggtgctaacaatttagcc
gcgggacaaaatctgaatccgggagacgcagagtctcaaaaatggcaaagtcgcctgatc
tctttatacgcaagagccaattatagcttcaatgagaaatatatgttgacagctaccgta
cgccgggatggttcttctaaatttggaacgaataacaaatggggtaccttcccttccgtt
tccgtgggttggaatatcacccaagagtcattcatggaaaaagtaaactggcttaacgac
ttaaagttaagtgtcggttatggtatcactggtaatcaaacaggattggacccctacaaa
accctcgagctttacggcacagatggtgtatattatgataccggttcttggctaccttct
tataaaatcagccaaaacgcaaacccagacttaaaatgggaacagacagcgatgttgaac
atcggacttgatttctccgtattggatagccgcctaggtggtcgtatcgaatggtataac
aaaaagacctctgacatgctttatacctatccggtgccaacccctccttacctatatagc
gagatcatggctaacgtgggcgatatgcgtaatacgggtatcgagttgagtttgaacgca
gacgctatccgcacgaaggatttcgattggaacatctccttaaacttggctcataatgag
aatgaagtgactcgtctatccaacgacgtatttacaatggataagatcttattaggtgac
gtattcatccggggtggaagctccagcggtacacacgtattggaagagggacgccctatc
ggacaattctatggcttggtttgcaacggtatcgatgagaacggcagatatatcatggta
gataaagacggtgacggcgagatttccgatccggcggattatgactacatcggatccgct
caaccgaaactgacatatggtatcaccaatactttccgctacaagaattttgatttgtca
ttcttcttgcgtggaacgatcggtaatgatatattgaacgcgacccgcatggcatacgct
caatccggattcttgccgggaacaaacgcattggatgatccattgacctatacgttaagc
gaaactccaagattctccaactattacttagagaaaggttcttttatgcgtctcgacaac
ttgactttaggttataagatcaaagcattgaatggtatccgtgtttatttcacggcgcaa
aacctattcgttatcacgaaatataaaggtcttgatcccgaagttcctatggattcagga
gacggtttaaccccgggtgtagaacctcgtgaattttatccgaaggcacgcacattctct
gttggattaaacttgaatttctaa
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