KEGG   Parabacteroides sp. CT06: CI960_21095
Entry
CI960_21095       CDS       T05011                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
parc  Parabacteroides sp. CT06
Pathway
parc03030  DNA replication
parc03410  Base excision repair
parc03420  Nucleotide excision repair
parc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:parc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CI960_21095
   03410 Base excision repair
    CI960_21095
   03420 Nucleotide excision repair
    CI960_21095
   03440 Homologous recombination
    CI960_21095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:parc03032]
    CI960_21095
   03400 DNA repair and recombination proteins [BR:parc03400]
    CI960_21095
Enzymes [BR:parc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CI960_21095
DNA replication proteins [BR:parc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CI960_21095
DNA repair and recombination proteins [BR:parc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CI960_21095
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CI960_21095
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2 HHH_5 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: AST55658
UniProt: A0A223HT89
LinkDB
Position
4833539..4836304
AA seq 921 aa
MKLFLIDAYALIYRSYYAFIKNPRINSKGVNTSAIFGFINSLEDVLKRENPTHIAVAFDP
KGPTFRHEAFEQYKAQREETPEVIRQSVPIIKEIIEAYNIPILEVPRYEADDVIGTVSKQ
AEKEGFEVYMMTPDKDYGQLVSEHIFMYRPKFGGDYEIMGVPEVLNKYGLTSTEQVIDLL
GLMGDASDNIPGCPGVGEKTAQKLLTEFGSIENLLANTDKLKGAQKKKVEENAEQIRFSK
FLATIKTDVPIKFDAARCIREKPNEERLTEIYTELEFRTFINKLSSEPVKAAPKGPVQGD
LFAIFTPESTEEPKKSILTDLKSTPHNYYLTDTEEKQADLARFLLGQEFFAFDTETDGID
PLKAGLVGMSFAVKENEAWYVPVPANSVEAAKVVERFSPALQNPKSLKIGQNIKFDILVL
RKYNVKVAGPLFDTMIAHYLLNPELRHGMDYLAETYLKYQTVHIEELIGPKGKNQLSMRN
VPVEQIAEYAAEDADITLKLKNYFAPELKKEGLESLFTTIEMPLIYVLAEMEATGVTLDT
VALKQSSGELTASMNKLEQEVYELAGTEFNINSTKQVGEILFDRLKLDEKAKKTKTGGYS
TSEDVLEKLRSKHPIIGKLLEYRGLKKLLSTYIDALPELINPQTGKIHTSFNQAVTSTGR
LSSTNPNLQNIPVRDDLGREIRKAFIPDNTDCLFFSADYSQIELRIMAHLSGDPHMIEAF
QSGADIHAATAAKIYGIPVEEVTSDMRRKAKTANFGIIYGISVFGLAERLGIPRSESKEL
IDGYFSTYPRIKEYMEESIKVAKEKGYVETIFKRKRFLPDINSHNAVVRGYAERNAINAP
IQGSAADIIKLAMVRIYERFEEEGLKSKMILQVHDELNFNVYKEEAEEVKKIVLEEMENV
MKLQVPLIADCGEGENWLEAH
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgaagttattccttatagatgcgtatgcgttaatttatcgctcctattacgccttcatc
aagaatccgcgtatcaactccaagggtgtgaatacctccgccattttcggttttatcaac
agtctggaggatgtattaaaacgtgagaacccgactcatatagcggtggcctttgacccg
aagggaccgaccttccgccatgaggccttcgagcaatacaaggcacaacgggaagagacg
ccggaagtgatccgtcaatccgtccctatcattaaagaaatcatagaggcttacaatatt
ccgattctggaagtaccccgctacgaggcggacgatgtgatcggcaccgtgtccaaacag
gcggagaaggaaggcttcgaggtgtacatgatgacgccggataaagattacggccaattg
gtgtccgaacatatatttatgtatcgtccgaaattcggaggcgattacgagatcatgggc
gtgcccgaggtcttaaacaagtacggcctcacgagtacggagcaagtgatcgacttgctg
ggactgatgggcgacgcttccgataatatccccggctgtccgggtgtcggcgagaagacc
gctcaaaaactactgaccgaattcggaagtatcgagaacctgttagcgaacactgataag
ttgaaaggcgcgcaaaagaagaaggtagaggagaacgccgagcaaatccgtttctccaaa
ttcttggcgacgatcaagacggatgtccctatcaagttcgatgccgcccgttgcattcgt
gaaaagccaaacgaagagcggctgactgagatttacacagaattggaatttagaacattt
attaacaaactaagttctgagccggtcaaagccgctccgaaaggtcccgttcaaggcgat
ttgttcgcgatttttacgcccgagagtacggaagagcccaaaaaatcgattctcacggac
ttaaagtccaccccccataactattatttaactgatacagaggaaaaacaagccgattta
gcccgctttttattgggtcaagaatttttcgcctttgacacggaaaccgacggtatcgat
cccttgaaagccggattggtcggaatgtcgttcgccgtgaaagaaaacgaggcttggtat
gtccctgttcccgccaactcagtagaggcggcgaaagtagtggaacgcttctcccctgcc
ctgcaaaatccgaaatcattaaagatcgggcaaaacatcaaattcgatattttggtactt
cgtaaatacaacgtgaaggtagccggtcctctgttcgatacgatgatcgcccattacctg
ctgaatccggaattgcggcacggaatggattacctagcggagacctacctcaagtaccag
accgtccacatcgaggaactgatcggcccaaaaggaaagaaccagttatcgatgcgaaac
gtacccgtggagcaaatcgccgaatacgccgccgaggacgcggacatcacgctcaagcta
aagaattatttcgcgcccgagttaaagaaggaaggactggaatccctcttcaccacgatc
gagatgccattaatatatgtattagcggaaatggaggccaccggcgtcacgctggatacg
gtagcgcttaagcaatcttcgggggaacttaccgcctccatgaacaaactggagcaagag
gtttacgagctggccggcacggaattcaacatcaactccacgaaacaggtcggcgaaatc
cttttcgaccgcttgaagctggacgagaaagcgaagaagaccaaaactggcggttacagt
accagcgaggatgtattggagaaacttcgcagcaaacatcccatcatcggcaagctcctt
gaataccgcggacttaaaaagttattaagtacctatatcgacgctctacccgagttgatc
aatccgcagaccggaaagatacatacctctttcaaccaagcggtaacatctaccggacgc
ctcagctctaccaatccgaacctgcaaaacattccggtacgggacgatctgggccgtgag
atccgtaaggcatttatcccggacaatacggattgcctcttcttctcggccgactactcc
cagatcgagcttcgtatcatggcccacctgagcggtgacccgcatatgatcgaggctttc
caaagcggagcggatatccacgccgccacagccgccaagatctacggaatcccggtagaa
gaagtaaccagtgatatgcgccggaaggcgaaaaccgccaacttcggtatcatctacggc
atctccgtcttcgggctcgccgagcgtctgggcatccctcgttctgagtccaaggaactg
atagacggttatttcagcacctacccccgcatcaaggaatacatggaggagagcatcaag
gtagccaaggaaaaaggatacgtagagaccattttcaagcgcaagcgtttccttccggat
atcaactcacacaacgccgtcgtacgcggctatgccgagcgaaacgcgatcaatgcccct
atccaagggagcgccgccgatatcatcaaactagcgatggtacgcatttacgaacgcttt
gaggaagagggattgaaaagcaagatgatcctccaagtacacgatgagttaaacttcaat
gtctacaaagaggaagccgaggaggtaaagaaaatcgtgctggaggaaatggaaaacgtc
atgaaactacaagtccccttaatcgccgattgcggcgagggagagaactggttggaggcg
cattaa

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