Parabacteroides sp. CT06: CI960_21160
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Entry
CI960_21160 CDS
T05011
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
parc
Parabacteroides sp. CT06
Pathway
parc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CI960_21160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parc03400
]
CI960_21160
DNA repair and recombination proteins [BR:
parc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CI960_21160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_27
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AST55670
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Position
complement(4847067..4849679)
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AA seq
870 aa
AA seq
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MAKVVETPLMKQYFDIKAKHPDAILLFRVGDFYEMYGEDAVIGAEILGIVQTKRANGVGQ
HVEMAGFPHHALDSYLPKLVRAGKRVAICDQLEDPKLTKKLVKRGITELVTPGVSINDNI
LNHKENNFLASIHFAKEVCGISFLDISTGEFMTAEGSIDYIDKLLNNFSPKEVLIERGNK
KRFEEAFGPRFFIFELDDWIFTTSAAEDRLLKHFETKNLKGFGVQHLKLGIIASGAILYY
LDQTQHTHISHITALSRIEEDRYVRLDKFTVRSLELVGTMNDEGTSLLDVIDKTISPMGS
RMLRRWILFPLKDVKPIQERQEVVDYFFREPETKELLDTQLEQIGDLERIISKVAVGRVS
PREVVQLKVALRAIEPIKEACMASGEPSLCRIGEQLNACALIRDRIEKEINNDPPSLVNK
GGIIAKGVNEELDDLRAIAYSGKDYLLKVQQREIELTGIPSLKIAFNNVFGYYIEVRNTH
KDKVPANWIRKQTLVNAERYITEELKEYEEKILGAEEKILALETRLFNELVLALTEYIPP
IQMNANLIGRIDCLLSFAKAAEANKYIRPVVSDSDKIDIKGGRHPVIEKQLPLGEPYIAN
DVYLDDEKQQIIIITGPNMAGKSALLRQTALITLMAQIGCFVPAESAHIGIVDKIFTRVG
ASDNISVGESTFMVEMNEASDILNNMTSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEH
PNAKAKTLFATHYHELNEMERAFKRIKNYNVSVKEVGNKVIFLRKLIPGGSEHSFGIHVA
KMAGMPKSIVKRSNEILKQLESENRQEGIGGKPVKAIASAAEGYQLSFFQLDDPVLSQVR
DEIKNLDVNNLTPLEALNKLSEIKRIITGK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagttgtggaaacccctttgatgaagcagtatttcgatataaaagcgaaacat
ccggacgctatccttttattccgggttggagacttttacgagatgtatggcgaggacgcc
gtgattggcgcggaaatactgggtatcgtacagaccaaacgtgcgaatggcgtagggcag
catgttgagatggcgggatttccacatcatgccttggattcttatctgccgaagttggtg
cgggccggaaagcgtgtggctatttgcgaccagctggaagaccctaagttgacgaagaaa
ctggtgaagcggggtattacggaattggtgactcccggtgtttccatcaatgataatata
ctgaatcataaagagaataatttcttggcctctatccatttcgccaaggaggtatgtggt
atttctttcttggatatctctaccggcgagttcatgacagcggagggttccatcgattat
atcgacaaattactcaataatttttccccgaaggaagtgttgatcgaacggggaaacaag
aagcgtttcgaggaggctttcggtcctcgtttctttatctttgagctggatgactggatc
tttacgacctcggccgccgaggatcgcctgttgaagcatttcgagacgaagaacttgaag
ggttttggcgtacaacacttgaaattaggtattatcgcttccggagcgattctgtattat
ctggaccagacccagcatacgcatatttcccatatcaccgctttatcccgtatcgaggag
gatcgatacgtccgcttggataagtttacggtacgcagcttggaactggtgggtacgatg
aacgatgagggaacaagcttgttggacgtgatcgataagacgatctcgccgatgggctct
cgtatgcttcgccggtggatactattcccgctaaaggatgtaaaaccgatccaagaacgc
caagaggtcgtggattatttcttccgtgaaccggagacaaaggagttgctggatacgcag
ttggagcagatcggcgatttggaacgtattatctccaaggtggctgtcggccgtgtatct
cctcgtgaggtggttcagctaaaggtcgcgcttcgtgcgatcgagccgatcaaggaggca
tgtatggcgagcggggaacccagcttatgccggatcggggagcaattaaacgcttgcgcc
ttgatccgcgaccggattgagaaagagattaataacgatcccccttcgttggtcaataag
ggaggaattatagcgaagggtgtcaacgaggaattggatgacttgcgtgccatcgcttat
tccggcaaggattatttgttgaaggtacagcagcgcgagatcgaattgacgggtatccca
agcttgaagatcgctttcaacaacgtcttcggctattatatagaggtacgtaatacccat
aaggataaagtcccggcgaattggatccgtaaacagaccttggtgaacgccgagcgctat
attaccgaggagttgaaggaatacgaggagaagatattaggggcggaagaaaagatcctt
gctctggagacccgccttttcaatgagctggtattggccttgacggaatatattccgcct
atccagatgaacgcgaacttgatcgggcgtatcgattgccttttatctttcgccaaggct
gcggaggcgaataagtatatccgtccggtcgtgagtgattccgacaagatcgacataaag
ggaggtcgccacccggtaatcgagaaacaactgcccttgggagaaccttatatcgccaat
gatgtctatctggatgacgagaaacaacagatcatcattatcacgggtccgaatatggcc
ggtaagtccgccttattgcgtcagacagccttgattacgctcatggcgcaaatcggttgc
tttgttccggccgagagcgcccatatcggtatcgtggataagatatttacccgtgtaggc
gcctcggataatatctcggtgggtgagtctacttttatggtagagatgaatgaggcctcc
gatatattaaataatatgacttcccggagcttggtgcttttcgacgagttagggcggggt
accagtacctacgatggcatatcgatcgcttgggcgatcgtggaatatattcatgagcac
ccgaatgcgaaggcgaagacgctgttcgctacccattaccacgagctgaacgagatggag
cgtgcctttaagcggatcaagaattataacgtatcggtcaaggaagtagggaataaggtg
atattcttgcgtaagttgataccgggaggaagcgagcatagctttggtatccacgtggcg
aaaatggccggtatgcctaaaagtatcgtgaagcgttcgaatgagatcttgaagcagttg
gagtccgagaatcgtcaggaaggcatcgggggtaagcctgtaaaagcgatcgcgtctgcc
gccgaggggtatcagctgagtttcttccagttggatgatccggtgttgagccaagtacgg
gatgagatcaagaacttggacgtgaataatcttacccccttggaagccttgaacaaactg
agtgaaattaagcggattattacggggaaataa
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