Parabacteroides sp. CT06: CI960_21735
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Entry
CI960_21735 CDS
T05011
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc
Parabacteroides sp. CT06
Pathway
parc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI960_21735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parc03021
]
CI960_21735
Transcription machinery [BR:
parc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CI960_21735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
HTH_23
HTH_11
HTH_Tnp_ISL3
PF0610-like_N
HTH_Mga
HTH_40
HTH_38
HTH_DeoR
HTH_10
HTH_28
HTH_36
HTH_AsnC-type
HTH_Tnp_4
Xre-like-HTH
HTH_20
NirdL-like_HTH
PCI
Ppx-GppA
Motif
Other DBs
NCBI-ProteinID:
AST55777
LinkDB
All DBs
Position
4998859..4999425
Genome browser
AA seq
188 aa
AA seq
DB search
MKVDGHLLIDLKNGDEKAFETLFWKYNEHVYHFIYSLLYEKSMAEDLTQNVFLKIWEKHE
TIDVEQNFDAYLFTIARNLVYKETENRLLSEKLTESLQRQLSDVDSLMEERIDAESLREY
INSLIEELPLSRREIFRLSRHEHLSYKEIAERLSISEKTVETQLSRALRFLRDRLSSDGF
LCLITLFL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggatggacatttgcttatagatctgaagaatggagatgaaaaggcttttgag
actctattctggaaatataatgagcatgtatatcattttatttactcattactatatgaa
aaatctatggcagaggacttgacccaaaacgtttttcttaagatttgggagaagcatgag
acgatagatgtggagcaaaactttgacgcctatctattcaccatcgcccgtaacttagtt
tataaagagacagagaatcggctactctccgagaaactgacggaaagcctacaacgacag
ctatcagatgttgattcgcttatggaagagcgaattgatgcggagtctttacgggaatat
attaatagcttgatagaagaattgccgttgtcccgtcgggagatatttcgtttgagccgt
catgagcatttatcctataaagaaatagcggaacgcctctctatctctgaaaagactgtg
gagacacagttgagtagggctttgcgttttttgcgagatcgactttcttctgatggcttt
ctttgccttataacactctttttatag
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