Parabacteroides sp. CT06: CI960_21755
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Entry
CI960_21755 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_21755
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_21755
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
AST55781
UniProt:
A0A223HTK8
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Position
5004638..5006467
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AA seq
609 aa
AA seq
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MKKNILLSGLVALLAVFSGCEMNEEPKSEASVDMVFSSENGLKTYTYSFYNVLPSRGSAF
RRDATADYGVKNSLGGMEVGAYTTNSATSWSWSALRNINFFLENNVNESLSTTIRDNYNG
IARLFRARFYFDKLVQYGEVPWIDKVFNEAEDPDLYNPRDTRDVIIGHILEDLDYAYTNI
LEEDVTHNSTIVNKWTAAAFKSRVCLFEAAWRKYHAADQLDIARTGCTEYSAKDLYKLAA
EAAKEVMDNGPYKLYTSGAYSDGRGAYRELFIADKAVTTEVMMAIETDKVLGLGEQNWWY
NSSTYGPHLCMSRKFMLSYLNADGTPYVEKKADGSYKNFVEETTGRDTRLNQTIRGADYT
RKNASGVYEPTAANFTGHTLTGYQFTKFAMDDVAYDDAATNDNDIPIMRYAEVLLNYAEA
KAELGELTDADWAATIGALRSRAGITGGTPQTGTLTTRPSSAEPYIASYYPTISDPSLLE
IRRERGIELCLEGLRLNDLKRWNCCDLWVNDPWEGIFIPSLNQPLDVNGDGNYDAYFYDT
DKIADEKYAAIGVYVGTNKSNVLNVKPVQGGYLMEYNYAGRSWPARQYLYPIPEVVIQFN
TNLSQNPGW
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaatatactattaagcggtctggtggcacttttggctgtattttcggggtgc
gagatgaatgaggaaccaaagtcggaggcttctgtggatatggtgtttagctccgagaat
ggtttgaagacgtatacgtactcattttacaatgtcttgccttcccgaggaagcgctttc
cggcgtgatgctacggcagattatggggtgaaaaattccttgggtggtatggaggttggc
gcttatactacgaatagcgcgacgagttggtcatggtccgctcttcgtaatataaatttc
tttttggagaataacgtgaatgagtcactaagcacgactatccgtgacaattataatggt
atcgcacgcttgttccgtgctcgcttctattttgataaattggtacaatatggcgaggta
ccttggattgataaggtatttaacgaggctgaagacccggatctttataacccgcgtgat
acacgtgatgtgattatcgggcatatcttggaggatttggattatgcgtatacgaatata
ttggaagaggatgtcacgcataattcaacgatcgtaaataaatggacagctgccgctttc
aaatctcgtgtttgcttgtttgaggctgcttggcgtaaataccatgccgctgaccaattg
gatatcgctcgtacgggatgtacggaatattcggccaaagatttatataaactagcggct
gaggcggctaaggaagttatggataacggaccgtacaaactttatacttcgggtgcttat
agcgatggccgtggagcgtatcgcgaacttttcattgccgataaggccgttaccacggag
gtaatgatggctatcgagactgacaaggtgttaggactgggtgagcagaattggtggtat
aattcctctacttacggaccacacttatgcatgagccgtaaatttatgctgtcatacttg
aatgcggatggtacgccttatgtcgagaaaaaagcggatggaagctataagaatttcgtg
gaggagacaacaggacgtgatacccgcttgaaccagacgatccggggagcggattatacc
cgcaagaatgcttctggtgtttatgagccgaccgcggctaattttacgggacatacattg
acgggatatcagtttacgaagtttgccatggatgacgtggcttacgatgatgcggctacg
aatgataatgacattcctatcatgcgctatgctgaggttttgttgaactatgctgaggct
aaggctgaattaggcgaactgactgatgcggattgggcggctacgataggtgcgcttcgt
tctcgtgcgggaattacgggaggcacaccacagacaggtacattgacaacccgtccgtca
tccgcagagccttatatcgcttcttattacccgacgatctctgatccttccttgttggag
atccgtcgcgaacgtggtattgaactttgtctggaaggtttgcgcctaaatgatttgaaa
cgttggaattgttgcgatctttgggtgaacgatccttgggaaggtatctttatcccatca
cttaaccaaccgttggatgtgaatggcgatggtaattatgatgcctatttctatgatacg
gataagatcgctgatgagaagtatgctgcgattggtgtctatgtgggtacaaataagagt
aatgtgcttaacgtgaagccggttcaaggaggttatttgatggagtataattacgccgga
cgtagctggccggctcgtcagtacttatatccgataccggaggtagtaattcagttcaat
acgaatctaagccagaatccgggctggtaa
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