KEGG   Parabacteroides sp. CT06: CI960_21805
Entry
CI960_21805       CDS       T05011                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc  Parabacteroides sp. CT06
Pathway
parc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:parc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI960_21805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:parc03021]
    CI960_21805
Transcription machinery [BR:parc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CI960_21805
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE HTH_24 HTH_TIMELESS HTH_40 HTH_10
Other DBs
NCBI-ProteinID: AST55791
LinkDB
Position
5021049..5021612
AA seq 187 aa
MTEISSDIRMFNELYREYKARFVFFAKMYVRDEFVAEDIVVDSLLYYWENKENLSHQSNI
PAYVLTIVKNKCLNYLRHERTREDIVKQLQDQNAWELQLRIMTLEACEPEFLFSEELRKI
ATETIDSLPSLSKEIFIRSRYENQSNKEIAEALGLSIKSIEYHITKTLKILRKMLIDYFP
LWLFFWC
NT seq 564 nt   +upstreamnt  +downstreamnt
atgacggaaatctcatcagacatacgtatgtttaacgaactttaccgtgaatataaagct
cgatttgtttttttcgcaaagatgtatgttagggatgagtttgtggcggaagatatcgtt
gtggatagccttttgtattattgggagaataaagagaatctgagccatcagtcaaatatc
ccggcttacgtcttgactatcgtgaaaaataagtgtttgaattatttgaggcatgaaaga
acccgtgaggatatcgtaaaacaattgcaggatcaaaacgcatgggaactccagcttcgg
attatgaccttggaagcgtgtgagccggagtttttattctcggaagagttacggaagatc
gcgacagaaacgatagattccttaccttctctctctaaagagattttcataaggagccgc
tatgagaatcagagtaacaaagagatcgctgaagctttaggattatctatcaagagcatt
gaatatcatataactaaaacattgaagatcttgagaaagatgttaattgattatttccct
ttatggcttttcttttggtgctaa

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