Polynucleobacter arcticus: DN92_00710
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Entry
DN92_00710 CDS
T09901
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pard
Polynucleobacter arcticus
Pathway
pard03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DN92_00710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pard03400
]
DN92_00710
Enzymes [BR:
pard01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DN92_00710
DNA repair and recombination proteins [BR:
pard03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DN92_00710
Prokaryotic type
DN92_00710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
eIF3m_C_helix
Motif
Other DBs
NCBI-ProteinID:
QKM59679
UniProt:
A0A6M9PH00
LinkDB
All DBs
Position
complement(121415..122188)
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AA seq
257 aa
AA seq
DB search
MYSFSAADIPEDWRALLGDYFESPQWQELQTNLRAELDQNVAKICPEPQNFFKALALTPV
AKVKVVILGQDPYHSPGLAQGLAFSIPENIPTNARAFPSSLRNISKALALEGFGALPNGN
LHCWADQGVLLLNTALSVKLGEAGSHTSLGWKSLIDRLIGSLAKHRPHLVWLLWGGHAQS
KLPLIEAGADQLILQSSHPSGLGVYKTDQPFLQPGGKASCGHFTKANKWLITHLHSPVEW
VDKPTRSTDKDLFTLTG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgttttccgctgcagatattcccgaggattggcgcgccctgctgggtgactat
tttgagtctccacaatggcaagagttgcagaccaatctgagggctgagctggatcaaaat
gtggcgaagatttgccctgagccccagaactttttcaaagcgttagcgctgacgccggta
gccaaagtcaaggtcgtcattttgggacaagatccgtatcactccccaggacttgctcag
ggactggccttttcgattcctgaaaatattccgaccaatgcccgagcatttcccagttca
ttgcgcaacattagtaaagcactcgctttagaaggttttggcgcccttcccaacggtaat
cttcattgctgggctgatcaaggcgttctgctactcaatactgcgctcagcgtcaaatta
ggtgaagctggcagccataccagcctgggctggaaatcgctcatagatagattgattggt
tccctagctaaacatcgaccacatttagtttggctattgtggggcggtcatgcccaatct
aagcttccactcattgaggctggagccgatcaattgattctgcaatcctcccacccatcg
gggcttggggtctataagacagatcaaccctttttacagcccggcggcaaagccagttgc
gggcattttacgaaggccaataagtggttaattacacacctacactctccggttgaatgg
gttgataagcctacccgctctacggataaagacctgttcaccctaactggctaa
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