Polynucleobacter arcticus: DN92_01095
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Entry
DN92_01095 CDS
T09901
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pard
Polynucleobacter arcticus
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pard03016
]
DN92_01095
Enzymes [BR:
pard01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DN92_01095
Transfer RNA biogenesis [BR:
pard03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DN92_01095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Gluconate_2-dh3
Motif
Other DBs
NCBI-ProteinID:
QKM59745
UniProt:
A0A6M9PLB2
LinkDB
All DBs
Position
201343..203331
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AA seq
662 aa
AA seq
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MHLLYEEGGDIKVATVQSASGTGDAESWQATSLSGKKIKLKAKEVWLRFEKPEPQALMDE
ATVSSKEIDLQFLWDCAPDDEFDLVDVAKEYFGAQATIPQQTALAIALQGAPVFFRRKGR
GRFLRAPLEQLQAGLAALERKQKELEQQAAWQQELVSGTFPETLKSQANQLLFSPDKNTS
AYKALIAACTESGESPAQLMIRCKAIDSPLQYHQAMFLKTHFPNGANHDEGLAVEQAIFD
AVIAELPLAEVNAFSIDDAGTTEIDDALSVTALADGGHRIGIHIAAPGLAITKDDALDRV
ARSRMSTVYFPGDKITMLPDTVIQQFSLDEGAARPALSIYVDIDGAGVVDKDSLQLRAEM
VPMGANLRLENIEHLVTEESLADEAADYSYRQELSILWTAAKLLHAGRQEQRVVNGLRAE
QLGVIDPNALARDFHFQIKDVDGVQKVEITPRQRGSILDTIVAEWMIYCNSASGRLLADH
GLPGLFRTQKGWGPLRTRMQTTPGPHEGLGLDYYAWCTSPLRRYSDLVNQWQLIALAKHG
ITAKMVAPFPPRDATLMGIAADFEACYSAYGEYQDRLEKYWCLRWIMQDEVPQQVFVRHL
KEGMSRVEPIPLHLPVPELAAHPRMTRAEVSIADVDLLQLSAGVRVLHIETPEVPESDAS
PA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttatatgaagaaggtggcgacataaaggttgctacagtccagtctgcctcg
ggcactggagatgcggagtcatggcaagctactagcctatctggtaagaagatcaaatta
aaagccaaagaggtttggttgcgctttgagaaaccagagccacaagcattgatggatgag
gccactgtctcatctaaagagattgatttgcaattcttatgggactgcgctcccgatgat
gagtttgacttggtggacgttgcaaaggagtactttggtgcacaagcaacgattccacag
caaactgccttggcgatcgccttgcaaggtgcgcccgtatttttccggcgcaaaggtcgt
ggacgttttctaagggcgccgcttgagcagttgcaagctggcttagcagcgcttgagcgt
aagcaaaaagaattggagcaacaggctgcttggcagcaggagctggtgtctggcacattc
ccggaaactctcaagtcccaagccaatcagttgctgttttctccggataaaaatacatcg
gcctataaggccttgattgcagcttgtaccgagtctggtgagtcacccgcacaactcatg
atccgttgcaaagcaatagactcacctttgcaatatcaccaagcaatgttcttaaagacc
cattttccgaatggagcaaatcacgatgagggtttggcggtagagcaagccatattcgat
gcagtgattgctgagttgccgctggcggaagtaaacgctttctcaatcgatgatgcaggc
actacagaaattgatgatgctttgtcggtgactgcacttgcagatggtgggcatcggatt
ggtattcatattgccgccccaggtttggccatcactaaggatgatgctcttgaccgggtt
gcacgttcgcgcatgtcgacagtgtattttcctggtgacaaaattacgatgttgccggat
acggtgattcaacaattctcactcgatgagggcgctgcccgtccagctttatcaatttat
gttgatatcgatggtgctggcgtagtagataaagactctttgcaattgcgtgccgagatg
gttccaatgggagctaatctgcgcttggaaaatatagagcatctcgtgacagaagaaagt
ctagcggatgaagcggctgattattcgtatcgtcaagagttaagcatcttatggacagca
gccaagctgttacatgctggacgtcaagagcagcgagtagtcaacggactgcgcgctgag
caattgggggtgattgaccccaatgctttggcgcgcgattttcattttcaaatcaaagat
gttgacggcgtacaaaaagtggaaatcacgccacgtcaacgtggctccatcctagatacg
atcgttgctgagtggatgatttattgcaatagtgcttcaggacgtttacttgctgaccac
ggtttacccgggctgttccgtacccaaaagggctggggcccattgcgtacccgtatgcaa
actacccccggcccccatgagggtttgggattagattactacgcctggtgtacatcgcca
ctacgtcgttattctgatttagtcaatcaatggcaacttatcgctttggctaagcatggc
attactgcaaagatggtggcgccatttcccccgcgcgatgcaaccttaatgggtattgca
gcagactttgaagcatgttactcagcttacggtgaatatcaggatcgcttagaaaagtat
tggtgcttgcgttggatcatgcaagacgaagttcctcagcaagtctttgtaagacatctt
aaagaaggtatgtcgcgggttgagcctattccactgcatttacctgtaccagagttggct
gcgcatcctcgtatgactcgtgcggaggtaagtattgccgatgtcgatctactgcagttg
agtgctggggtacgcgttcttcatattgaaaccccagaagttcctgagagtgatgccagt
cctgcttaa
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