Polynucleobacter arcticus: DN92_01285
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Entry
DN92_01285 CDS
T09901
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pard
Polynucleobacter arcticus
Pathway
pard00521
Streptomycin biosynthesis
pard00523
Polyketide sugar unit biosynthesis
pard00525
Acarbose and validamycin biosynthesis
pard00541
Biosynthesis of various nucleotide sugars
pard01100
Metabolic pathways
pard01110
Biosynthesis of secondary metabolites
pard01250
Biosynthesis of nucleotide sugars
Module
pard_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DN92_01285 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DN92_01285 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DN92_01285 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DN92_01285 (rfbB)
00525 Acarbose and validamycin biosynthesis
DN92_01285 (rfbB)
Enzymes [BR:
pard01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DN92_01285 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QKM59780
UniProt:
A0A6M9PAU0
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Position
241161..242219
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AA seq
352 aa
AA seq
DB search
MILVTGGAGFIGGNFVLDWLANPNADGILNLDKLTYAGNLTTLESLKDDPRHVFVHGDIG
DKALVAQLLKDYQPRAIVNFAAESHVDRSIHGPADFVNTNIVGTFNLLECAREYWNGLDD
AEKKAFRFHHVSTDEVYGSLSATDPAFTETNSYEPNSPYSASKAASDHLVRAWFHTYGFP
VVTTNCSNNYGPYHFPEKLIPLVILNALNSKALPIYGDGQQIRDWLYVGDHCSAIREVLA
HGKLGETYNIGGWNEKANIDVVKTICTILDELQPRPDNKSYSEQITFVKDRPGHDRRYAI
DAGKVERELGWRPAETFDTGIRKTVQWYLDNPVWVEGVVSGSYRDWLQKQYS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagtaactggcggtgctggctttattggtggtaacttcgtgttagattggctt
gctaaccccaatgccgatggcattctaaatttagacaaattaacttacgccggtaatttg
actaccctggaatcgttaaaagatgatcctcgccatgtctttgtgcatggtgatattggc
gacaaagctttggttgcgcaattgcttaaggattatcagccgcgtgctattgtcaatttt
gctgctgaaagtcatgtggatcgatcgattcatggccctgctgattttgtaaatacgaat
attgtgggtacctttaatctgcttgaatgtgctcgtgaatattggaatggtttagacgac
gctgagaaaaaagcgtttcgctttcatcacgtatctactgatgaagtttatggttctcta
tccgctaccgatcctgcttttacggaaaccaattcctatgagcccaatagtccttattct
gcatctaaagcagcttcagaccatttagttcgagcctggtttcacacatacggtttcccg
gtagtcactacgaattgctccaataactatggcccgtatcatttcccagaaaagctcatt
ccactggtgattcttaatgcattgaatagcaaggcattgccaatttatggcgatggtcaa
cagattcgggattggctttatgtcggggaccattgttccgctattcgcgaggtcttagca
catggaaaattaggtgagacctataacattggtggttggaatgaaaaggccaatattgat
gttgttaaaaccatctgcactattttggatgaattacagccgcgccctgataacaagtct
tattcagagcagattacttttgttaaagatcgccctggtcacgatcgtcgctatgccatt
gatgccggtaaggtagagcgtgaattaggttggcgtccagcagagacctttgataccggg
attcggaagacggtgcagtggtatttggataatccagtatgggtagagggtgttgttagc
ggctcctatcgtgactggttgcaaaagcaatacagctag
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