Polynucleobacter arcticus: DN92_02010
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Entry
DN92_02010 CDS
T09901
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pard
Polynucleobacter arcticus
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pard03016
]
DN92_02010
Enzymes [BR:
pard01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DN92_02010
Transfer RNA biogenesis [BR:
pard03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DN92_02010
Prokaryotic type
DN92_02010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QKM59910
UniProt:
A0A6M9PB57
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All DBs
Position
complement(364475..365386)
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AA seq
303 aa
AA seq
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MPVRIDGVVLLDKPFGMSSQGAVTAVKRKLNAEKAGHTGTLDPMATGLLPICLGEATKYS
QDLLEADKTYIAQVKFGQRTDTGDAEGLVIEELPLPVFADEVAMKLALESLLPAFTGPIS
QVPPMYSALKRDGKPLYEYARAGVELERAPRDITIHAIRWTNINWPEATLEVSCSKGTYI
RVLAEDIGRALGCGAHLVGLRRTEVGHLTLEQSFTIESIQKGLQDSSSYILPVDALLQTL
PHLTVDEQQAKRLEMGQRVPLNMPSIEALVRIYRATAAPHNFIGTGDWRSGVLHPKRLIS
SAH
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgccagtacgtatcgatggtgttgttttgcttgataaaccttttggcatgagctcgcaa
ggtgcagtcacagcagtgaaacgtaaattgaacgcagaaaaagcagggcatacaggcacc
ttagatcctatggcaactggcttgctaccgatctgtttgggcgaggcaactaaatattcc
caggatttgcttgaggccgataagacctatatcgctcaggtgaaatttggtcagcgcacc
gatacgggcgatgctgaaggtctagtgattgaagagctgccactcccggtattcgctgat
gaagttgctatgaagttggcgctggaatcgttgctacccgcatttaccggccctattagc
caggttcccccgatgtattctgcgctcaagcgcgatggcaaacctttgtatgaatacgct
cgtgccggcgttgagttagagcgtgctccacgggatattacgattcatgcgattcgctgg
accaatatcaattggcctgaagccactttagaggtcagctgcagtaagggtacctacatc
cgcgtattggcagaagacattggcagagccttaggctgtggcgcacacttagttggcttg
cgccggactgaagtaggtcacctcactttagagcagtctttcacaatcgaatcgattcaa
aaaggcttgcaagacagctctagctatattttgccagtcgatgcgctcttgcaaacattg
ccgcacttaacggtagatgagcagcaagcaaagcgtttagagatggggcaacgcgtcccg
ctcaacatgccgtctattgaggcactcgtgcgcatctatcgtgctacggctgctcctcat
aactttattggtactggcgattggcgctctggggtgttgcatcccaagcgtttgatttct
tctgcccattaa
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