Polynucleobacter arcticus: DN92_02315
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Entry
DN92_02315 CDS
T09901
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pard
Polynucleobacter arcticus
Pathway
pard03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN92_02315 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pard03019
]
DN92_02315 (recQ)
03400 DNA repair and recombination proteins [BR:
pard03400
]
DN92_02315 (recQ)
Enzymes [BR:
pard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DN92_02315 (recQ)
Messenger RNA biogenesis [BR:
pard03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DN92_02315 (recQ)
DNA repair and recombination proteins [BR:
pard03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DN92_02315 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
RecQ_Zn_bind
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKM59964
UniProt:
A0A6M9PDA8
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All DBs
Position
complement(427322..429160)
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AA seq
612 aa
AA seq
DB search
MQSSHQVLHDVFGFDQFRGSQESIVKHVVAGGDALVLMPTGAGKSLCYQIPSLVRRGVGV
VVSPLIALMQDQVDALTQLGVKASFLNSSLDAATSQKVTSQLLAGDLDLIYVAPERLMNP
GFLSILDRLNAGPGIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERFPNVPRIALTATAD
APTRAEIVERLSLESAEQFVSSFDRPNIKYRVLQKQSAKQQLEHFLDAEHADDSGIIYCL
SRRSVEETAQWLKDRGWDAMPYHAGLSVEKRSANQKRFLREEGVIMVATVAFGMGIDKPN
VRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGFGDVVNLRQMVDSGEASEDRKRV
ERQKLNALLGYCESTTCRHQAILRYFGETHAGGCGNCDNCLEPVATWNATHEAQKALSCV
YRTGQRFGVTHLIDVLLGKVTPRVKQFFHEQVSTFGIGSELNQAQWNSIYRQLVAGGYLD
ADIALHGGLKLVDAIALPVLRGEQEVWLRKETGYSKSKATKAGSKKSSTHPFNNIADENL
WELLKAKRTELAREQGVPPYVIFHDSTLQEMVKSSPTTLDQFSRIGGVGQAKLERYGEHF
IQVIQESLESSN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatcgagccaccaagtacttcatgacgtttttggctttgatcaatttcggggctct
caagagtctattgttaagcatgtagtagcaggcggagatgctttggtcctcatgccgact
ggtgccggtaagtcgctgtgctatcaaatcccctcgcttgtgcgccgcggtgttggggta
gtagtttcacctttaattgcactgatgcaagatcaagtggatgcgttaacccagttgggt
gttaaggcttcctttctcaactccagtttggatgcggctacatctcaaaaagtgaccagt
cagctgctcgctggagatcttgatttaatttatgtcgctccagaacgtctcatgaatcct
gggttcctatcgatactggataggctcaatgcggggcctggaattgcactcttcgctatc
gatgaggcgcactgtgtttcacaatggggccatgattttcgcccagaatatcgccagttg
actgtactgcacgagcgatttccgaatgtacctcgtatcgccttaacggctacggcagat
gcaccgacccgagcagaaattgtagagcgtctatcgttggaatctgctgagcaatttgtc
tctagctttgatcgccccaatattaagtatcgagttctacaaaaacaaagcgctaaacaa
cagttagaacacttcttagatgccgagcatgccgatgattcaggaattatttattgccta
tcgcgtcgtagcgtagaagaaactgcgcaatggttaaaagatcgtgggtgggatgcaatg
ccataccacgctggtttaagtgtcgaaaagcgtagcgctaatcaaaaacgctttttgcga
gaagaaggcgtcatcatggtcgcaacagtagcctttggtatgggcattgataagcccaac
gttcgctttgtggcccatctggatctgcctaagagtatggaggggtactaccaagaaacc
ggacgcgcagggcgtgatggcttgcctgcaaatgcctggatggcctatggattcggggat
gtggtgaacttgcgacaaatggtagattctggcgaagcttccgaggaccgtaagcgggta
gagcgccaaaaactgaatgctttgctaggctattgtgagtctacgacatgccgccatcaa
gcaatcttgcgctactttggagagacgcacgctggtggctgtggtaattgcgacaactgt
cttgagccagttgcgacttggaatgcgacacatgaagcgcaaaaagcattgtcatgtgtg
tatcgtactggtcagcgtttcggtgtgacccacttaattgatgtactcttgggcaaagtg
actcccagagtgaagcaattttttcatgagcaagtgagtacatttggcattggttcagag
cttaatcaggcccagtggaatagtatttaccgtcagttggtagcgggtggttatttagat
gctgatattgcattgcatggcggcttaaagctagtggatgctattgccttgcctgtcctg
cgcggagagcaagaggtttggctgcgcaaagaaacgggctactccaagagtaaagctaca
aaagctggatcaaaaaagagctctacccatccctttaacaatattgcagatgaaaactta
tgggagttgctcaaggctaagcgtactgagctggcacgcgaacaaggggtgccaccctat
gtgatttttcatgacagtactttgcaggagatggtgaaatcttcgcctactaccttagat
caattcagtcgtattggcggggtcgggcaagccaagctggagcgctatggcgagcacttt
attcaagtcattcaggaaagcctcgagagctccaactaa
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