Polynucleobacter arcticus: DN92_03445
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Entry
DN92_03445 CDS
T09901
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pard
Polynucleobacter arcticus
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pard03016
]
DN92_03445
Enzymes [BR:
pard01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DN92_03445
Transfer RNA biogenesis [BR:
pard03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DN92_03445
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QKM60172
UniProt:
A0A6M9PJQ1
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All DBs
Position
677712..679184
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AA seq
490 aa
AA seq
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MSKHQQYDRSDLARIAAIVMEEKGLEPSFSKEVHDQLDLIVSPGQDLDPSIQDLSDLLWC
SLDNDDSKDLDQLTVCSDAGNGNHKIYIAIADVDALIKKDTPIDDHAKHNTASVYTSARI
FPMLPEKLSTNLTSLNFNEIRLALVTEIVVGSKGEILGSTIYRAKVCNKAKLAYDAVSAW
IEGKGEMPAAMADVPGMDLQIKIQDEIAQRLRLKRQRAGSLQLEIFQPKAVFEGDRVIGI
AEQEHNRGRQLIEEFMIATNGSTARFLLKKGIPSLRRVVRSPDRWLRIVELAKQYGEVLP
NEASSRALSEFLAKRHQADPLRFPDLSLVVVKLMGPGEYVLEQPGATPIGHFGLAVQDYM
HSTAPNRRYPDLITLRMLKSAINNEPNAYETQELYALALHCTTQEDAIRKVERRMRKSEA
ALFLEPFIGKDFNGVITGVTPNYGWVRIFNPPAEGMLVKLPRDAFIGNKVRVKLTSTNVE
MGHINFMLIA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacatcagcaatacgaccgctccgatttagccagaattgccgccatcgtcatg
gaagaaaaagggcttgagcctagtttttctaaagaggttcatgatcaactggatttaatt
gtttcacctggacaggatttagacccctccattcaagatctttcagaccttttatggtgc
tctctcgataatgatgattcaaaagatttagatcagttaacagtatgcagcgatgcagga
aatggcaatcataaaatttacatcgccattgccgatgtcgatgcgctcatcaaaaaagat
actccgattgatgatcatgctaaacacaatacagcctcggtttacacgtccgcacggatt
ttcccgatgctgccagaaaaactctctactaacctgacctccctcaattttaatgaaatc
aggttagctttagttaccgagattgttgtgggtagtaaaggagaaattctgggctccaca
atttatagagcaaaagtatgcaataaagcgaagttagcttatgacgccgtatcagcctgg
atcgaaggcaagggtgaaatgccagccgccatggctgatgtacctggcatggatctgcaa
atcaaaattcaagacgaaattgcacaacgattacgcctgaaacggcaacgagctggatca
ttacaactagagatatttcaaccgaaagccgtatttgagggtgatcgggtgattggcatt
gccgaacaagaacataaccgaggaaggcagctcattgaagagttcatgattgcaaccaat
ggatctactgcccgctttctactcaaaaaaggtattccctctctacgtagggtggttcgc
agtccagaccgatggttacgcattgttgagctagccaagcaatatggagaggtattgccc
aatgaagcaagctccagagccctctcagaatttttagccaaacgccaccaagcagaccct
ctgcgctttcctgacctatccttagtcgttgtgaaactcatggggcccggagaatacgta
ttagagcaaccgggagccactccaattggtcactttggattagcggtgcaagattatatg
cactccaccgcgcccaatcgacggtaccccgatttaattactttacgtatgctcaagagt
gccattaataatgagcctaacgcatatgaaactcaggaactctatgcactagcgcttcac
tgcactacacaggaagatgccatccgtaaagtggagcgcagaatgcgtaaatcagaagca
gccctattcctagaacctttcatcggtaaggatttcaatggcgttattactggtgtgact
ccgaactatggatgggtcaggatttttaatccacccgccgaaggcatgctggtgaagctt
cctcgtgatgcatttatcggcaataaggtccgggtaaaactaacgtcaaccaatgttgaa
atggggcacatcaactttatgctaattgcttaa
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