KEGG   Polynucleobacter arcticus: DN92_05150
Entry
DN92_05150        CDS       T09901                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pard  Polynucleobacter arcticus
Pathway
pard00010  Glycolysis / Gluconeogenesis
pard00020  Citrate cycle (TCA cycle)
pard00260  Glycine, serine and threonine metabolism
pard00280  Valine, leucine and isoleucine degradation
pard00310  Lysine degradation
pard00380  Tryptophan metabolism
pard00620  Pyruvate metabolism
pard00630  Glyoxylate and dicarboxylate metabolism
pard00640  Propanoate metabolism
pard00670  One carbon pool by folate
pard00785  Lipoic acid metabolism
pard01100  Metabolic pathways
pard01110  Biosynthesis of secondary metabolites
pard01120  Microbial metabolism in diverse environments
pard01200  Carbon metabolism
pard01210  2-Oxocarboxylic acid metabolism
pard01240  Biosynthesis of cofactors
Module
pard_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:pard00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DN92_05150 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DN92_05150 (lpdA)
   00620 Pyruvate metabolism
    DN92_05150 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DN92_05150 (lpdA)
   00640 Propanoate metabolism
    DN92_05150 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DN92_05150 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DN92_05150 (lpdA)
   00310 Lysine degradation
    DN92_05150 (lpdA)
   00380 Tryptophan metabolism
    DN92_05150 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DN92_05150 (lpdA)
   00670 One carbon pool by folate
    DN92_05150 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pard04147]
    DN92_05150 (lpdA)
Enzymes [BR:pard01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DN92_05150 (lpdA)
Exosome [BR:pard04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DN92_05150 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored Pyr_redox_3 AlaDh_PNT_C GIDA FAD_binding_2 Biotin_lipoyl_2 GCV_H FAD_binding_3 NAD_binding_8 HI0933_like DUF7408 3HCDH_N
Other DBs
NCBI-ProteinID: QKM60477
UniProt: A0A6M9PNV5
LinkDB
Position
1018889..1020688
AA seq 599 aa
MAKQIILVPDIGDYTDVPVIEVLIKVGDVIEKEQPLLVLESDKATMEVPADTAGTILSIS
VKAGDKVGKGSIVAEVETGAVATPQAVAPVSPLAPPAPITPPVAIPAISAPSAGQYSGKV
DHECEVLVLGAGPGGYSAAFRSADLGKSTILVERYAKLGGVCLNVGCIPSKALLHTTSVM
DEVKTMSKHGISYGAPKIEIDQLRGYKDSVIAKLTGGLAGMAKARKVSVVRGLGRFLDAN
HVEVELTQGDGQDLAGKKEVVRFQRAIIAAGSQPVKLPFLPEDPRIVDSTGALLLKSIPK
RMLVIGGGIIGLEMATVYSGLGSRIDIAEMMDGLMAGADRDLEKVWEKFNAGRFENIMLK
TRATKAEVKADGIQVSFEGENAPSEPQIYDLVLVAVGRTPNGKKIDASAAGVMVDERGFI
SVDNQMRTNVNTIFAIGDIVGQPMLAHKAVHEGHVAAEVAAGEKSYFDAKQIPSVAYTDP
EVAWAGLTEDQCKAQGIAYEKGLFPWAASGRAIANGRDEGFTKLIFDATSKRIIGGGIVG
THAGDLIGEVCLAIEMGADAVDIGKTIHPHPTLGESVGLAAEAALGHCTDLPPVKKKAH
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggctaagcaaataattcttgttccagatattggcgactatacagatgtgccggtaatt
gaagtactcatcaaagtgggtgatgtcattgaaaaagagcagcctctactggtgctcgag
tccgataaggctacgatggaagttcctgctgatacagcaggaaccattctgagtatttcc
gttaaggcgggcgataaagttggtaagggcagcattgttgctgaagtagagacgggtgct
gtagctacacctcaggcagtagccccggtttcgcctttagcacccccagctccaattaca
ccgccagtagctattccagcgattagcgccccaagcgctggtcaatatagcggcaaggta
gatcacgagtgcgaagtattggtacttggtgccggcccaggtggttatagcgcggcattc
cgcagtgctgatctcggtaagagcaccattttggttgagcgttatgccaaattaggcggc
gtttgcttaaatgtaggttgcatcccctctaaggctttattacatacaacctccgtcatg
gatgaagtcaaaacgatgtcaaagcatggcattagttatggcgctcccaagattgaaatt
gatcaattgcgtggctataaagactcggtcattgctaagttaactggcggattggccggt
atggctaaagcgcgtaaggtgtccgtagtgcgaggtcttggccgcttcttggatgctaat
cacgttgaggttgaactcactcagggtgatgggcaagacttagccggcaaaaaggaagtc
gtgcgttttcagagggcaatcatcgcagcgggaagtcaacccgtaaagttaccattctta
ccggaagacccgcgcattgtagatagtactggggccttgttgctcaagagtattccaaag
cgtatgttagttattggtggcggcatcatcggcttggagatggcaactgtatacagcggt
ttaggctcacgcattgatattgctgaaatgatggatggcttgatggctggtgccgatcgt
gatttagaaaaggtttgggagaagtttaatgccggccgttttgaaaacatcatgctgaaa
acgcgcgccactaaagcagaagtaaaagcggatggtattcaagtcagcttcgagggggag
aatgctccatctgagccacaaatctacgacctggtattggtagcagtaggccgcactcct
aacgggaaaaagattgatgcttctgctgccggtgtgatggtggatgagcgcggatttatt
tctgttgataatcaaatgcgtactaatgtgaatacgatctttgccattggtgacattgtt
ggtcaacccatgttggcccacaaggctgtgcatgagggtcacgttgctgctgaagtagct
gctggcgagaaatcctattttgatgccaaacagattccttcggttgcctacaccgaccca
gaggtagcctgggcaggtttgaccgaagatcaatgtaaagctcaaggaattgcttacgaa
aaaggtttattcccatgggctgctagcggcagagctattgccaatggtcgcgatgaaggc
ttcactaaactcattttcgatgccactagtaagcgcatcattggtggtggaattgtagga
acacacgctggtgatttaattggtgaagtgtgccttgcaattgaaatgggagcagatgca
gttgatatcggcaaaactattcatccgcaccctaccttaggtgagtcggtcggtttagct
gcagaagctgctctcgggcactgcactgatttaccaccagtcaaaaagaaagcgcattaa

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