Polynucleobacter arcticus: DN92_06735
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Entry
DN92_06735 CDS
T09901
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pard
Polynucleobacter arcticus
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pard03400
]
DN92_06735
Enzymes [BR:
pard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DN92_06735
DNA repair and recombination proteins [BR:
pard03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DN92_06735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
MF_alpha_N
Motif
Other DBs
NCBI-ProteinID:
QKM60752
UniProt:
A0A6M9PLE0
LinkDB
All DBs
Position
complement(1330415..1333408)
Genome browser
AA seq
997 aa
AA seq
DB search
MFQPFPTLSHQERPHAWAVTPNAGALKELAKGIWNCAVQTNQRPLVVLSTAGPLMGVRAA
LEKYRPNNLPSHIAFLPQVMSFNDWLEAAPGAWKFPKKQTDLERWLSVYINLRKHKTLQS
WFKAESEAGAWGLAQAVIDACDALSEAVVPLMQSEINTLVQNQTLDAELWVKKVETLLDQ
AIAKAYVGLSRKVVDQESTVLLAFWRYLSSPGDPVIRKHFALAAHLQVASANQSLARPLI
WVETADPKPIDQEAISQYLFEYSQFAPVVSIGMDWHSVALWSEALTGQDLEGQLKPVDDE
QQMLIDRNIQASFHNGWKLLAARRFEELAWAAAKSIESHLIAGKTNIALVAQDRLAARRA
RALLSRFGPSLRIRDETGWKLSTTRAAASLNSWLELIRSPKEGPSASALLEFLQNPFFDI
AHTLQRPAEACVSLIAQLEDILIASQAKSGWETFRMAIERANAYSSSRGSVPHESLLGLL
TFLQRHHVQWLELKLDCENAYALLNANLQEMGMAQQLEKDSAGKQLLEVLKTFDLGTGTY
RQVAMRLPEWLSLLKTIIEEASYQEVGQQAEATLSILPLSSTRLREFDAVVLVGCDEQQL
PAFSEPPLFFSDTLNRLLKASTVTAQYIQQARDLSQLLISCPQVDLLWQSKSKSGEPLRP
SAWISRLRTQLPDWPILEARSDTHVGHSAPLLESVVTVNSDIALPISMSPSAYKALRDCP
YRYYVRSILGLRKAKEFEEGFDASLAGQVLHTLLKNFFQALKTEEKKSLSSIHQGEDARR
DWMQEHLTKHSEKEFERLIKDDARVTGTLRDWQKQIPNFVDWQLKREADGWQYHDAELPV
GFMVTMTDPDGVQREIGIAGRADRFDVNANNPTAAAVIDYKNQGITKIKKRAERLLDDPQ
LLIYARAVNENAIAAHLPGRTIEQAEWVSLKADLKKAEDKIVRAYSVEQMPEMMEQFSDQ
LNEDLEVLWARKPMKAFAPDSVCQYCEARGICRKGMW
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagccatttccaacgctttctcatcaagagcggcctcatgcttgggccgttaca
cccaatgcgggcgcgcttaaagagcttgcaaagggcatttggaattgtgcggtgcaaaca
aaccagcgccccttggtggtactgagcactgctggaccgctgatgggtgtcagggcggct
ctagaaaagtatcgacccaataatctacccagccatatcgcattcttacctcaagtcatg
agttttaacgactggctagaagcagcgccaggtgcatggaagtttcccaagaaacaaacg
gatcttgagcgttggttatctgtttacatcaatctacgcaaacacaaaacattgcaaagc
tggtttaaggctgagagtgaagcgggagcttggggtttagcgcaagcggtgatcgatgca
tgcgatgcattgtcagaagcagtcgtgccgctaatgcaaagcgagattaataccttagtg
caaaaccaaactctcgatgcagagttgtgggtcaagaaagtagaaacgctattagatcaa
gcgatcgctaaagcctacgttgggttatcccgaaaagtcgttgatcaagaatccacagtt
ttgttggctttctggcgctaccttagtagccctggggatcctgtcatacgtaagcatttt
gcattagctgcccatttgcaagtagcaagcgccaatcaatctctggcaagacctttgatt
tgggtagagactgccgatcctaagccaattgatcaagaggcgatctctcagtatttgttt
gagtattcacaatttgcccctgtagtgagtattggaatggattggcattcagtagccctg
tggtctgaagcattaactggtcaagatctggaagggcagctcaagccagtagatgatgaa
caacagatgctgattgatcgtaatattcaagccagctttcacaatggctggaagttgcta
gcagctagacgctttgaggaattggcttgggcagcggccaaatctattgagtcacactta
attgccggtaagaccaatattgctttagttgcacaagatcgtttggccgcaaggagggcg
cgggctttgttgtcacgctttggccccagtcttcgcattcgtgatgaaaccggttggaag
ctgtcaaccacccgtgctgccgcatcgctcaatagttggttagagctgattcgctcgccc
aaagaagggccgagtgcaagcgccttgctcgagtttttacaaaatccattttttgatatt
gcgcatacattgcaaaggccggcagaggcctgtgtcagcctgattgcgcagcttgaagac
atcttgattgcaagccaagcgaagtcgggttgggaaaccttcagaatggctattgagaga
gccaatgcttattcatcatcgcgtggtagcgtgcctcatgagtcactcttggggttgctc
actttcttgcaacgacatcacgttcagtggttagagctcaagcttgattgtgaaaatgcc
tatgcgcttctaaatgctaatctacaagagatgggtatggcgcagcaacttgaaaaagat
tctgccggcaagcaattgctagaagtactcaagacctttgatttaggtacggggacttac
cgacaggtcgctatgcgcttaccagaatggctgagcttactcaagacgattattgaagaa
gcctcttatcaagaagtaggtcagcaggccgaggcaactttgagtattctgcctctgagc
tcaacacgtttgcgtgagtttgatgctgttgtcttggtgggctgcgatgaacaacagttg
ccagcattttctgagccgccattatttttctcggatacgctcaatcgtttattaaaagcc
tctactgttacggcgcaatatattcagcaagcaagggacttgtcccaactgttaatctct
tgtcctcaggtggatttgctttggcaaagtaaaagtaaaagcggtgagcccctcaggcca
tcagcttggattagtcgcctacgtacccaacttccagattggccaatattagaggcaagg
tctgacacccatgtaggtcactccgctccattgctggagtcagttgtaacggttaactca
gatattgctttgccgattagcatgtctcctagcgcttataaagcattaagagattgtcct
tatcgatactatgttcgcagcatcttgggtttgcgtaaggcaaaagaatttgaggagggg
tttgatgcctcattagcagggcaggtactacacaccttattaaaaaacttctttcaggca
ttaaaaacggaagagaaaaaatctctgtcgagtattcatcaaggtgaagatgcacgtcgt
gattggatgcaagaacatcttacaaagcactccgaaaaagagtttgagcgcttgattaag
gatgatgctagggtcacgggtactttacgcgattggcaaaagcagattcctaactttgta
gattggcagctaaagcgtgaggcagatggttggcaatatcacgatgcagagttaccagtt
ggattcatggtgacgatgactgaccctgatggggtgcagagagagattgggattgcgggg
cgcgccgaccgctttgatgtaaatgctaataatcctactgccgcagcagtcattgattac
aagaaccaaggcatcactaaaatcaagaagcgagcggagcgtctattagatgatccgcaa
ttactaatctatgcccgcgctgtaaatgagaatgccattgcagcacatcttcctgggcgc
accattgagcaggccgagtgggtttcattaaaagcagatcttaagaaagccgaggacaaa
attgtcagagcatattcggtggagcagatgccggagatgatggagcagttttcggatcaa
ctgaatgaagacctagaagtcctatgggcgcgcaagcccatgaaagcctttgcacctgat
agcgtttgccagtattgcgaagctagaggcatttgtagaaaggggatgtggtga
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