Polynucleobacter arcticus: DN92_07550
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Entry
DN92_07550 CDS
T09901
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pard
Polynucleobacter arcticus
Pathway
pard03410
Base excision repair
pard03430
Mismatch repair
pard03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DN92_07550 (recJ)
03430 Mismatch repair
DN92_07550 (recJ)
03440 Homologous recombination
DN92_07550 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pard03400
]
DN92_07550 (recJ)
DNA repair and recombination proteins [BR:
pard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DN92_07550 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DN92_07550 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DN92_07550 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QKM60892
UniProt:
A0A6M9PLT5
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All DBs
Position
1488917..1490662
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AA seq
581 aa
AA seq
DB search
MSVFAQRPFSDRTAGWLQQSGLHPLLARLYAARGVDKPEELSLDLKQLLSPTELRNCIST
ATLLADILERKESMLVVADYDCDGATACAVALRGLKMLGGPDTAIQFLVPNRFTMGYGLT
PEVVDLAAQQTPKPKYLITVDNGIASEAGVDRARELGMEVIVTDHHLPGDRLPKATAIVN
PNQPGCTFPSKALAGVGVMFYLLVALRAELRQRGKFTAQTQPKIENLLDLVALGTVADVA
QLDRNNRILVSNGLKRIRMGVSQAGIQALFQAAVRDPRKANTFDLGFAIGPRLNAAGRLA
DMTLGIRLLLCDQPDEAIELAYELDRINRERRVIEGGMQEAALAHLAEDQLAGTMAERSS
ICLWNQQWHQGVVGIVASRLKERFNRPAIVFAPADGAAGEELRGSGRSISGFHLRDALDV
VSKREPGLILKFGGHAMAAGLSIRKADFEQFDTLFQLVAAELLSDELLERRHIHDGVLDP
SEFTTETGDLLAEEIWGQGFPQPIFYGEFEIGQQSLMKEKHLRLQLRPLGDGHLASKPLT
GVWFNRTQPLPAKARLAYRLVTDRFQGQARVQLMIEAHDEG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatttgcccaacgccctttctctgaccgtacggccggctggttacagcagagt
ggtctacacccattgctagccagattgtatgcagcccgcggggttgataagcctgaagag
ttatcactcgatctcaagcaactactctcacctaccgagttaagaaactgcatcagtact
gccaccttgctcgccgatattcttgagcgcaaagagtccatgctggtagtagctgactat
gactgtgatggtgctactgcctgtgccgttgcactgcgtggattgaagatgctgggtggg
cccgatacggcaattcagtttttagtaccaaaccgctttacgatgggctacggattaact
ccagaggtagtcgatttagctgcccaacaaactccaaaacccaaatatctcatcacagtc
gataacggcattgctagtgaggccggcgtagatcgagcccgcgagctgggcatggaagtg
atcgtgaccgatcatcacctcccaggagatcgactccccaaagccactgccatcgtcaat
ccgaatcaaccgggttgcaccttccctagcaaagcactcgccggcgttggagtgatgttc
tatttactagtagcgcttcgtgcagagcttcgtcagcgcggaaaatttactgcgcagact
caacccaaaattgaaaatctattagacctcgtcgcattaggtaccgtagcggatgttgcg
cagctcgatcgcaataatcgcatcttggtttctaatggcttaaagcgtattcgcatggga
gtctcgcaggctggtatacaggcactctttcaggcggcggtccgcgatcctcgcaaagcc
aatacttttgatttgggttttgctattggcccacgactcaatgcggcaggacgtcttgca
gatatgactttgggcatccgcttgttactctgcgatcagcctgatgaagctattgagtta
gcgtatgagctcgatcgcattaatcgcgaacgtcgcgtgattgagggcggcatgcaagag
gctgctcttgcccatctcgctgaagatcagctagcgggaaccatggctgagcgctccagc
atctgcctttggaatcaacaatggcatcagggcgtggttggtattgtggcctcgcgcctc
aaagagcgctttaatcgtcctgccattgtgtttgctcctgcagatggtgccgctggcgaa
gaattacgcgggtctggaagatcgattagcggctttcatttgcgggatgccttggatgtg
gtttccaaacgagagcctggtttgattctcaaatttggtggccatgcgatggcggcggga
ctgtctattagaaaagcggattttgagcaattcgataccctctttcaactggttgcagca
gagctattgagtgatgagttattagagcgtcgccacatacatgatggcgtcctcgatccg
tccgaattcacaacagaaacgggtgacctcctggccgaagaaatttggggtcaaggcttt
cctcagccgattttttatggggaatttgaaattggccagcagagcctgatgaaagaaaag
catcttcgcttgcagcttcgtccactgggggatggccatttggctagcaaaccactcacc
ggcgtctggttcaatcgaacccagcccttaccagccaaggccaggctagcctaccgccta
gtgaccgatcgcttccagggtcaagctcgcgtacaactcatgattgaggctcacgacgag
ggctaa
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