Polynucleobacter arcticus: DN92_08055
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Entry
DN92_08055 CDS
T09901
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pard
Polynucleobacter arcticus
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pard03009
]
DN92_08055
Enzymes [BR:
pard01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DN92_08055
Ribosome biogenesis [BR:
pard03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DN92_08055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
QKM60980
UniProt:
A0A6M9PE03
LinkDB
All DBs
Position
complement(1583822..1584859)
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AA seq
345 aa
AA seq
DB search
MKSEPIFKPSQVKIAAPAAVLLQTIGPEEAGQRLDNYLLRWAKGVPKSHVYRIIRSGEVR
VNKKRAEPTTRLIEGDVVRVPPVRIAEPAQMAAVNTAQTKSRAQGYSDKMPILFEDEALL
IVNKPAGLAVHGGSGIALGVIETLRITRPELKFLELVHRLDRDTSGVLLLAKKRSALVEL
HRQIREGQTDKRYYLLAHGEIAQGAGTMQLKFALHKYLLANGERRVRVDPDGLPSHTALR
VTKVMHRGEVAITLAEAQLKTGRTHQIRVHLQKLGHSILGDDKYGFEDQDKLVKSKRLYL
HAHLAGFTHPRTGEKMRIESPLPAEFTAMMKNFEVTTEPSRAIDI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccgaacccattttcaagccttcacaggtaaaaatagctgctcctgctgctgtg
cttcttcagactattggtcctgaggaggctggccagcgtttggataactacctgctccgt
tgggctaaaggggttcccaaaagccacgtttatcggattattcgctctggcgaagtccga
gtaaataagaaaagggctgaacccactacccgcttaattgagggggatgtggttagagtc
ccgccagttcggatagccgagcctgcccaaatggcagccgttaatacagcccaaaccaaa
tctcgggcacagggctattccgacaaaatgcccattttgtttgaggatgaagccttatta
atagtgaataagcccgcaggtttagctgttcatggaggttcaggcattgctttgggtgtt
attgagaccctgcgcattacccgtcctgaactcaaatttctggagctagtccatcgctta
gaccgagatacctcaggcgtcttactcttggctaaaaagcggagcgctttggtggaactg
catcggcagattcgtgaaggtcagactgataagcgctactacttgctagcccatggagaa
attgctcaaggtgcgggcacgatgcagctgaaatttgcattacataaatacctattggcc
aatggtgagcgccgcgtccgggttgacccagatggcttaccaagccatacggctttgcgc
gtcactaaagtaatgcatcgtggagaagtggcaattacccttgctgaggctcagttaaaa
accgggcgtacccaccaaattcgagtccatttgcagaaattaggacactctattttgggt
gatgacaaatatggctttgaagatcaagataagcttgtgaaatcgaagcgcctgtactta
catgcccacttggctggctttactcacccacgtactggcgagaaaatgcgcattgagtcg
cctttgcccgctgaatttaccgccatgatgaaaaactttgaagtcacaactgaacccagt
agagcgattgatatttaa
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