Polynucleobacter arcticus: DN92_08890
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Entry
DN92_08890 CDS
T09901
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pard
Polynucleobacter arcticus
Pathway
pard03420
Nucleotide excision repair
pard03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DN92_08890
03430 Mismatch repair
DN92_08890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pard03400
]
DN92_08890
Enzymes [BR:
pard01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DN92_08890
DNA repair and recombination proteins [BR:
pard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DN92_08890
MMR (mismatch excision repair)
Other MMR factors
DN92_08890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKM61133
UniProt:
A0A6M9PYU7
LinkDB
All DBs
Position
complement(1747140..1749530)
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AA seq
796 aa
AA seq
DB search
MYSDLLANLNPEQREAVTLPPVNQHGQAQSALILAGAGSGKTRVLTTRIAWLIQTGQVSP
IGVLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQIL
DTQDQLSAIKRLLKGLKVDDEKYPPKQLQYFIAHAKERGQRARELSVGDDFQAKMAQLYE
AYDEQCQREGVVDFAELLLRSYELLKHNEAIRTHYQERFRHILIDEFQDTNALQYAWLKL
LSGHDASRINVSSAGSSAVFAVGDDDQSIYAFRGADVENMRLYEQQYHPMMVKLEQNYRS
HGHILDTANYLISNNTDRLGKNLRTDAGHGEPVRIFDAPSDHAEAAWLVDEIKALVNSGI
KRTEIALLYRSNAQSRIIEHALFSAAIPYRVYGGLRFFERAEIKHALAYLRLLENPNDDT
SFSRVVNFPTRGIGARSIEAVQDAARAQNSSLYLAASTLDGKAGASLGGFVRLVDHMREA
TRHNTLPETVEFVIQNSGLIQHYLSEREGQDRVENLQELINAATAFIAEEGYGQDATAAT
LPGENAPGIVEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTSVFITGLE
EGLFPHENSVNEQNGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEEL
PSDSLKWLTPKVKDARWGGGNSYGNAGRSGSTWQDGYTRQRDSETNDFFDSGSDRQRPAK
QLGRVGSASTTVTRMAAPPRGNYPFTIGQNVFHTKFGEGRVTGLEGNDADARAQVNFKRH
GVKWLQLSIAKLAAIN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagacctcctcgcaaaccttaatccagaacaacgcgaggcagtgaccctcccg
cccgtcaatcaacatggtcaggctcagtccgccctgatcttggctggcgccggtagcggc
aagacccgcgtcctcacgacccgtatagcttggttgatccaaacaggccaggtttcgcct
attggggtcttagcggtgaccttcaccaataaggctgccaaggagatgatgttgcgctta
agtgccatgttgcccattaatacccgtggtatgtggatcggcacttttcatggactttgc
aaccgtttattgcgcgcacaccacaaagaggctggtttgccctctacttttcagattttg
gacacgcaggatcagttatccgccattaagcgtcttttaaagggtttaaaggtcgatgat
gagaaataccctccgaagcagctgcaatacttcattgcccatgccaaagagcgtggccaa
cgcgctcgtgagctatccgtaggcgatgatttccaggccaagatggcccaactatacgaa
gcctacgatgagcagtgccagcgtgaaggggtggttgattttgctgaactcttgctacgc
agctatgaattgcttaaacataatgaagcgattcggacccattaccaagagcgtttccgt
cacatcttgattgatgagtttcaagacaccaatgccttgcagtacgcttggctcaaattg
ctttctgggcacgatgctagtcgtatcaatgttagtagtgctggaagcagtgcggtcttt
gcagtaggcgatgacgaccaaagtatttatgctttccgtggcgcagacgttgagaatatg
cgcctttatgagcagcaatatcacccgatgatggtcaagcttgagcagaactatcgttcg
catggccacatcttggatactgctaattacctgatttcgaataacaccgatcggcttggt
aaaaatctgcgtactgatgcaggtcatggtgagccagtccgcatcttcgatgcgccaagc
gatcatgcggaagctgcttggcttgttgatgagatcaaagctttagtaaacagtggtatc
aagcgtactgaaattgctttgctctacagaagcaatgcccagtcacgcattattgagcat
gccctattttctgcagcgattccctatcgtgtttatggtggattgcgcttcttcgagcgt
gcagagattaagcatgctttagcctacttacgccttctagagaatccaaacgacgatact
tctttctcgcgagtggtcaatttcccaacgcgtggtatcggtgccagatcgattgaggct
gtacaagatgcggctcgcgcgcaaaacagttctttgtatttagcggcatcgactttggat
ggtaaagccggcgcttccttgggcggatttgtgcgcttagttgatcacatgcgtgaagcg
actcgtcacaacactttgcctgagacagtcgagttcgtgattcagaatagcggattgatt
cagcactatctctctgaacgcgaaggtcaagatcgggtagagaacttacaagaattaata
aatgcagcgactgcatttattgcggaagagggttatggccaagatgcaactgccgctact
ctgccaggtgaaaatgcaccgggtattgtggaggtttcaccattagcagcttttctatcg
catgcctctttagaggcgggcgataaccaggcacaagcaggtcaagatgctgttcagttg
atgacggtgcactctgctaaaggtttggagttcacctccgtatttattaccggactggaa
gaaggtttgtttcctcatgagaatagcgttaatgagcagaatggtttggaagaggaacgc
cgcttgatgtatgtggccattacccgcgccaaggagcgcttatatctttctcacacccag
tccagaatgttgcatggtcaagtgcgttacaacatgccatcccgcttcttggaagagttg
ccatcagattctttgaagtggctcactccgaaagtcaaagatgcccgttggggtggaggt
aatagttacggtaatgccggtcgatcaggatctacttggcaagatggctatacccgtcag
cgcgactccgagaccaatgatttctttgactctggcagcgatcgtcagagaccggccaaa
caacttgggcgcgttggttctgcctccactaccgtcaccagaatggctgcgccgccacga
ggcaattacccatttacgattggccaaaatgtgtttcatacgaaatttggagaaggccgg
gttacgggcttagaaggcaatgatgctgatgcccgcgcccaagtgaacttcaaacgtcat
ggtgtgaagtggctgcaactcagcattgccaagcttgcagcaataaactaa
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