Polynucleobacter arcticus: DN92_09770
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Entry
DN92_09770 CDS
T09901
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pard
Polynucleobacter arcticus
Pathway
pard03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DN92_09770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pard03400
]
DN92_09770
Enzymes [BR:
pard01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DN92_09770
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DN92_09770
DNA repair and recombination proteins [BR:
pard03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DN92_09770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QKM61292
UniProt:
A0A6M9PN18
LinkDB
All DBs
Position
complement(1939682..1940518)
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVEVTRLGIQPHLEGRKLNAVKIIDGRLRWPVPSNLSTLLSGQKVLGIERRGKYL
LMEFDTGYLLLHLGMTGTLRVLPSSDLLKPHDRVTFEFDKLSLRLHDPRKFGAVLWHSKS
SGPVQNNALLQKLGVEPFSPEFAGELGAQVLYRDSRKRSVAVKQFLLAGQAVVGVGNIYC
SESLFEAGIHPAKAAGKLTRPQCSRLAAAVRLILKKAIAAGGSSLKDFVNSEGDPGHFMV
QTKVYDRKDQPCKVCKTPIKQIVQAQRSSYFCPQCQKR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactccctgaagtcgaagttacccgattgggtatccagccccacttagaaggg
cgtaagctaaatgcagtcaagattattgatggtcgcttacgctggccggtacccagtaat
ttaagtacattactttcggggcagaaagtgctgggtatagaacgacgtggcaagtatttg
ttgatggaattcgatacgggttatttattgctgcatttgggcatgacaggaaccttgcga
gtacttccgagtagtgatttactgaaaccacatgatcgtgtcacattcgagtttgacaag
ctgagtttgcgtttgcatgacccccgaaagtttggcgccgttttatggcattcaaaatct
agcgggccggtccagaataatgcgctcttacaaaagctgggggtcgagcctttctcacca
gaatttgctggcgagcttggtgcgcaggttttataccgagactctcgtaaacgtagcgtt
gctgtgaaacaatttttattggcaggacaggcggtagtgggtgttggcaatatttattgc
tcagagagtttatttgaggccggcattcatccggcaaaggccgctggaaaattaacacgc
ccgcaatgctctcgattagctgctgcagtgagattgattttgaaaaaagcgatcgctgct
ggaggtagttcactaaaagacttcgtcaatagcgaaggtgatcctgggcattttatggtg
cagaccaaagtctacgatcgtaaagatcagccctgcaaggtctgtaaaaccccaattaaa
caaattgtgcaagctcagcgctcaagctatttttgtcctcaatgtcagaagcgctaa
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