Polynucleobacter arcticus: DN92_10530
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Entry
DN92_10530 CDS
T09901
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pard
Polynucleobacter arcticus
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pard03009
]
DN92_10530
Ribosome biogenesis [BR:
pard03009
]
Prokaryotic type
ribosomal protein modification factors
DN92_10530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QKM61427
UniProt:
A0A6M9PRC4
LinkDB
All DBs
Position
complement(2070963..2073164)
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AA seq
733 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVISDQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNISTENIRLSQNNIVDPENRYQQIFKIQVELPEDISANDRQGILRSIERCTVKKVVQA
GPEFVIEEVKNLDADAQTLLALKPAADASTYIAGKDLPLEQTIANMSGVLAKLGIKIEIA
SWRNLIPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERLSNNHFYAGAFWGED
IANSAFVHYPNERWFKPGNQDALPTEILDEHCRAIYNPDGELRSAHLIDTNSGNTERGVC
SLPYVRQSDGEIVYFPSNLIENLYVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEI
ALPDVPQEVLAKYPSILAGIQGLEEQGFPVLVKDASLGGIYPVMCVTLMNPQTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPPPTFASEAVTEPNNFVEHFIDSSGIVSWRF
FSAKSDYDFVEWDFSAHGENSNAEEAATLFGILSDMGKESYVAVYDQLGATACRILVPGY
SEVYPIEDLIWDNTNKALLFRTDILNLTTLGDESLSALLERLENNELDEYGDVATLIGIE
FDENTPWGQLTVLELKLLIHLALKQFDEAHELVGAFLQYNDNTVERKLFYQALNAVLEIE
LDDDLELDDYVGNLRRMFGDERIDAAIGSVDGSTRFYGLTPTSIKLEGLDRHHRLIDSYR
KLHAARAKMAASI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaggtcaactttctcgataagcttcgtcttgaggcgaagttcgatgatttc
acggtaatttcggaccagcctattcgctataaaggcgatggctcagcaccaggacctttt
gattactttctagcctcatccgctttatgcgcagcgtatttcgtgaaactgtattgtgac
actcgcaatatctctaccgaaaatattcgcctttcacaaaacaatatcgttgatccggaa
aatcggtatcagcagattttcaagattcaggttgaattaccagaagacatctctgcaaat
gaccgtcaaggcattttgcgctctatcgagcgctgcactgttaaaaaggttgtacaggct
gggccggagtttgtcattgaagaagtcaagaatttagatgcagatgcgcagaccttattg
gctttgaagccagctgcagatgcgagtacttacattgcgggaaaggatttgcccttagag
caaacgattgccaacatgtctggcgtattggccaagctaggcatcaagattgaaattgct
tcatggcgcaatctcattcccaatgtgtggtccttacatattcgtgatgcccattcaccg
atgtgttttaccaatggaaaaggggctacaaaagaaagtgcgctggcatcagccttaggc
gagtatatcgagcgcctgagtaataaccatttttatgccggtgcgttttggggtgaagat
atcgccaatagtgcatttgttcattatccaaacgagcgctggttcaagccgggaaatcag
gatgcgctaccaacagaaattttagatgagcactgtcgagcaatttataaccctgatggt
gaattgcgtagtgcacatttaattgacaccaattctggcaatacggagcgcggtgtttgt
tcattgccttatgtgcgccagtccgatggtgagattgtttattttccatccaacctgatc
gaaaatctgtacgtcagcaatggcatgagtgcaggaaacactttggctgaagcccaggtg
caatgtctgtcagagattttcgagcgggcagttaagcgtgaaattctcgaaggtgaaatc
gccctaccggatgtgccacaagaagtgcttgcaaagtaccccagtattttggctggcatc
caagggcttgaagagcagggctttccggtactagtaaaggacgcatcgctgggcggtatc
tatccagtcatgtgcgttaccttgatgaacccgcaaacaggtggcgtatttgcctctttc
ggtgcgcacccaagtctagaggtggcgctagagcggagtttgacggagttgttacagggc
cgcagtttcgaaggcctaaatgatttacccccacccacttttgcaagtgaggcagtgaca
gagccaaataactttgttgaacacttcattgattcgagcggcattgtgtcttggcgcttc
ttcagcgcaaaatcagattacgattttgttgaatgggacttctctgctcatggagaaaac
tccaatgcagaagaggcggcaacactgtttggcatcctcagtgatatgggtaaagaatct
tatgtcgcggtatacgaccagcttggggcaactgcctgccgaatcttggtgccgggctat
tctgaggtttatccgatagaggatctcatttgggacaacaccaataaagctttgttattc
cgtacagatattttaaatttgacaaccctaggtgatgaaagtctcagcgcgctactagag
cgccttgaaaataatgaactcgatgagtatggtgatgtcgccactttgatcggcattgaa
tttgatgagaatacgccatggggtcagctcacagtgctggagttaaagctattgattcat
ttggccttaaagcaatttgatgaggcccatgaactcgttggcgcctttcttcaatacaac
gacaatacagttgagagaaaattgttttatcaggccttaaatgcagttttagaaattgag
ttggacgatgacttagagcttgacgactatgtaggcaatcttcgcaggatgtttggtgac
gagaggatagatgcagctataggctcggttgacggaagtacccgcttttatggcttaact
ccaaccagtatcaagctagagggtctcgataggcaccaccgcttaatagatagctataga
aagttacatgctgctcgagccaaaatggccgcatccatatag
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