Polynucleobacter arcticus: DN92_10550
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Entry
DN92_10550 CDS
T09901
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pard
Polynucleobacter arcticus
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pard03009
]
DN92_10550
Enzymes [BR:
pard01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DN92_10550
Ribosome biogenesis [BR:
pard03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DN92_10550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QKM61431
UniProt:
A0A6M9PM24
LinkDB
All DBs
Position
complement(2076862..2078175)
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AA seq
437 aa
AA seq
DB search
MTDQKIPRSLPLSEAMTISAQAIGEVMAGRSLTEVLDQLDAHERPIVQSLTFDALRKWVR
SHELIKELIPKTPPPEVEHLLSVAIALFLHNGAEGKGYAVHTIVDQAVKACSEYEPTMYA
KGLMNAVLRKVSLAIQAENEKPYPPDPVPMFFPPWWRANLKRNYSKAWQAMLIQQAQRAP
LILRVNAQQHTRQEYQDLLQQAGITAEPIHSVAGTALDSALLLREPVPVADLPGFYSGAV
SVQDAGAQLAAVLLDPKPGERVLDACAAPGGKTAHVLELAQCDMIALELDGERLGKIGGN
LDRLRLQSDAVRVVRGDASKGAWWDGKLFDKILLDAPCSASGIVSRHPDIPFLRREADIQ
SLQTRQRAILEQSWKMLKSGGTLLYVTCSVFPEEGEDQAVWFATKHADALRLSAPGQILP
DELNDGFYYALFKKNGP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaccaaaaaataccgcgcagccttcctttatctgaggctatgacgatttcagcg
caagcaattggtgaggtgatggccggtagatctctcacagaggtgttggatcagttagat
gcgcatgagcgccccattgtgcagagcttgacttttgatgccctgcgaaagtgggtccga
tctcatgagctcattaaggaattgattccgaagacaccaccaccagaagtggagcacttg
ttgagtgtcgccattgccttgtttctgcacaatggtgcagagggtaagggctatgcagta
catacgattgttgatcaggccgtgaaagcctgtagcgaatatgagccaacgatgtatgcc
aaaggcttgatgaatgctgtgcttcgcaaggtcagtctcgcgattcaggccgaaaacgaa
aagccctatcctccggaccctgttcccatgtttttcccgccttggtggcgagctaactta
aagcgcaattattcaaaggcttggcaggcgatgttgattcagcaggcccaacgcgcaccc
cttattttgcgagtgaatgctcaacagcacacacgccaggaatatcaagacttgctgcaa
caggcaggaattacagcggaaccgattcattcggttgctggcactgcactagattccgct
ttgctattacgcgagccagtgccggtagcggatttgccaggattttatagtggcgcagtt
tctgttcaagatgctggcgcgcagcttgctgcggtcttgcttgatcccaagccaggtgag
cgcgtattggatgcttgtgcagctcccggcggaaaaacagcccacgtattagagcttgcc
cagtgcgacatgattgctttagagcttgatggcgaacgacttggaaaaattggcggcaac
ttggatcgtttgcgcctccagtctgatgctgttcgggtagtgcgcggggacgcctctaag
ggcgcttggtgggatggcaagttgtttgacaaaattttattagatgcgccttgctcagct
tccggaattgtttcaaggcatcctgatattccatttttgcggcgcgaagcagatattcaa
tctttacagacgagacagcgtgcaattttggagcagtcttggaagatgcttaagtcagga
ggaaccttgttatatgtgacttgttccgtgtttcctgaagagggcgaagatcaggcggtt
tggtttgctacaaagcatgcggatgcgttacgattgagcgcccccgggcaaattttgcct
gacgagctgaacgatggtttttactacgctttgtttaagaaaaatgggccatga
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