Pyrofollis japonicus: PYJP_03330
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Entry
PYJP_03330 CDS
T09484
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pare
Pyrofollis japonicus
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pare03016
]
PYJP_03330
Enzymes [BR:
pare01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PYJP_03330
Transfer RNA biogenesis [BR:
pare03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PYJP_03330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
DNA_pol3_beta
Motif
Other DBs
NCBI-ProteinID:
BEP16981
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All DBs
Position
335926..336474
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AA seq
182 aa
AA seq
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MSEKGRKAVLILHDIPWGIEIVEGKDIIEHILGKLPRTNLHVLEALYLLYKKHAILFTAE
DSEASFEELMRLYSVSNPYAWVEFEVYLDLKRRGRHPVPGPRPHTLLLKKRKNENKYTHY
VLVLEENRPVTLETLYSFIREAYSNDWEPVLAIVDRYGDITYYEALLFRPGETRLAEYGE
RT
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaaaaaggccgcaaagccgtcctgatacttcacgatattccttggggcattgaa
atagttgagggaaaagacatcatagaacatatactcggaaaacttccaaggactaattta
cacgtacttgaagcgctttatttgctctacaaaaaacacgccatattatttactgccgaa
gatagtgaagccagtttcgaagaacttatgaggctatatagtgtaagcaacccctatgca
tgggtcgagtttgaggtttaccttgatctcaagagaagggggcgacatcccgtacccgga
cccaggcctcatacactattgctaaagaagaggaaaaatgaaaacaagtacactcattat
gtgcttgttctcgaagaaaacagaccagtgaccctcgagaccctttactcttttatacga
gaagcatatagtaatgattgggaaccagtcctagccatagtagatcggtacggagacata
acatactatgaggcactattatttaggcctggcgagacacggcttgcagaatacggagaa
aggacatga
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