Pyrofollis japonicus: PYJP_04010
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Entry
PYJP_04010 CDS
T09484
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
pare
Pyrofollis japonicus
Pathway
pare03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PYJP_04010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pare03021
]
PYJP_04010
Transcription machinery [BR:
pare03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PYJP_04010
Prokaryotic type
Archaeal type
TFB
PYJP_04010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
HEAT
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
BEP17049
LinkDB
All DBs
Position
405589..406563
Genome browser
AA seq
324 aa
AA seq
DB search
MTEAKRIVIVNNDGLLVDHATGIVVDDLPFDYGPEWRAYDEHERMLRSRIGAPLTELVHD
NGLHTYIVYYEALRKGYARLARTHYKVTKGKYASKKMIGLLQHLGRICSEEDLPTRICED
SAWALKVIKKRVPNAGNENAVRAALMYALGVHGHPLFYKYNSPSLQRLLRRAGILFKLNE
EALVDSYVRHLIAELELPTIVELYAMKIYNVFIRGVGNPSPRVRAAAATYVAAKLADADA
TMDRLSKSLEITDMAMRTLLKKTRLRVLYLVDGGLVDEWHPGKDSHGIRQPKEIASRYGI
TSYSYIVNIPTSNKEPIAVIIYER
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtgacggaggctaagagaatagttatcgtcaataatgatgggctcttagtggatcatgct
actggcatagttgtcgatgatctgccctttgattatggcccagagtggagagcctacgat
gagcatgagaggatgctgcgcagcaggattggagccccgttgacggagcttgtgcacgac
aacgggctgcatacatacatagtgtactatgaggctttgcggaagggctacgcgcggcta
gcgaggacgcactacaaggtgaccaagggcaagtacgcgtctaagaagatgatagggctg
ctgcagcacctcggcaggatctgctccgaggaggacttgccgacaaggatctgcgaggac
tctgcctgggcgctcaaggttatcaagaagcgggttccgaacgcggggaacgagaacgcg
gtaagggctgcgctaatgtatgccctcggcgtccatgggcaccccttgttctacaagtac
aatagtccgagcctgcagcgactcctacgcagggctggcatactctttaagctcaacgag
gaggcactcgtcgacagctacgtgaggcaccttatagcggagctggagctgcccacaata
gttgagctatacgccatgaagatttacaatgttttcataaggggtgttgggaaccccagc
ccacgcgtaagggctgctgcagcaacatatgttgcagcaaaactcgcggacgcggacgcg
acaatggaccgcttatcgaaatcactagagataacggacatggcgatgaggacgcttctc
aagaagaccaggctaagagtactctacctcgtcgacgggggactcgtcgacgagtggcac
ccaggcaaagacagccacggaatacggcaaccaaaggaaatcgcatcccgctacggcata
acatcctactcctacatagtcaacatacctacctctaacaaggagccgatagcggtgata
atatatgagcggtga
DBGET
integrated database retrieval system
