Pyrofollis japonicus: PYJP_04680
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Entry
PYJP_04680 CDS
T09484
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pare
Pyrofollis japonicus
Pathway
pare03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PYJP_04680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pare03021
]
PYJP_04680
Transcription machinery [BR:
pare03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
PYJP_04680
Prokaryotic type
Archaeal type
TFE
PYJP_04680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
GntR
HTH_20
HTH_IclR
HTH_24
Zn_Ribbon_TF
TrmB
HTH_9
HTH_36
HypA
MarR_2
Dimerisation
Sigma70_r4
MCM5_C
HTH_Crp_2
Malectin
HTH_47
HTH_11
Zn_ribbon_RPB9
Rpr2
Rrf2
HTH_5
RepL
HTH_27
Zn_ribbon_FGT1_1
MarR
Ccdc124
CTE_SPB4
Motif
Other DBs
NCBI-ProteinID:
BEP17116
LinkDB
All DBs
Position
complement(464709..465236)
Genome browser
AA seq
175 aa
AA seq
DB search
MGTEEAEKLYKFVEKLLDANARQVFQVLFEEGEELTEVDIAEKTGLKLNAIRRALNMLAE
QGLVVYRRQKHPEKNRLIFYWKVNYEALPAIIEARKKATLEKLKTLLSKEESTMYYVCPN
DGTRYTFEEALEHEFVCPRCGTMLVPDKDRELRIQILSQYISMLEAEINEDTKSR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaccgaggaggcagaaaagctatacaagttcgtagagaagcttctcgacgctaac
gcgaggcaggtatttcaagttctctttgaagagggcgaggaactgacagaggtcgatatc
gcagagaaaacaggcctcaagcttaatgcgataaggcgcgcactcaacatgctcgcagag
caagggcttgtagtttatcgtcgtcaaaagcatccggaaaagaataggctcatcttttac
tggaaggttaattatgaggctcttccagcgataatagaggcgaggaagaaggccactctt
gaaaagctcaagactcttttaagcaaggaagagtcaaccatgtattatgtgtgtccaaac
gacggcacgcgctatacctttgaggaggcccttgagcacgaatttgtatgccctcgctgc
ggcaccatgttagtgcctgataaggatagggagcttaggatacagatactgagccaatac
atatctatgctagaggcggagataaatgaggacaccaagtctcgttga
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