Pyrofollis japonicus: PYJP_05010
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Entry
PYJP_05010 CDS
T09484
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pare
Pyrofollis japonicus
Pathway
pare04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PYJP_05010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pare03019
]
PYJP_05010
03009 Ribosome biogenesis [BR:
pare03009
]
PYJP_05010
04131 Membrane trafficking [BR:
pare04131
]
PYJP_05010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pare04147
]
PYJP_05010
Messenger RNA biogenesis [BR:
pare03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PYJP_05010
Ribosome biogenesis [BR:
pare03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PYJP_05010
Membrane trafficking [BR:
pare04131
]
SNARE
SNARE associated proteins
Others
PYJP_05010
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PYJP_05010
Exosome [BR:
pare04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PYJP_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_22
TIP49
AAA_5
AAA_33
AAA_14
AAA_lid_PRS2_C
Vps4_C
AAA_28
nSTAND3
AAA_18
IstB_IS21
Mg_chelatase
RNA_helicase
AAA_24
AAA_25
ATPase_2
TsaE
AAA_17
ABC_tran
NPHP3_N
DUF815
AAA_3
Parvo_NS1
AAA_7
NACHT
Zeta_toxin
NB-ARC
PhoH
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
BEP17149
LinkDB
All DBs
Position
495964..498153
Genome browser
AA seq
729 aa
AA seq
DB search
MSSEIELRVAEARSRDVGRKIARISRDAMARLGVEVGDFIEIEGPKGIAVAQVWPLHPDE
DPNIIRIDGFIREAIGASVGDTVRVRRAANVQPATRVVLAPTEPMRFSRDFVEYVKDYLL
RKPLARGETIIIPFFGAGLRLVVVATQPGQFVYVTDQTQLEIREEPVKEEQLRRRGIPRV
TWEDIGDLEEAKEKIREIVELPMKHPELFKHLGIEPPKGILLYGPPGVGKTLLAKALANE
IGAYFIAINGPEIMSKYYGESEQRLREIFEEAEKNAPSIIFIDEIDAIAPRREEVTGEVE
KRVVAQLLTLMDGLKERGRVIVIGATNRPEALDPALRRPGRFDREIEIRPPDKRARKEIL
QVHVRNMPLADDVDLDKIAEMTHGYTGADLAALAKEAAMNALRRFIKSGKIDLNKPIPAE
VLKELKVTMADFIEAMKYVQPSLIREIYIEVPEVHWEDIGGLEDVKQQLREAVEWPLKYP
EVFEQMGIRPPKGILLFGPPGTGKTMLAKAAATESGANFIAVRGPEILSKWVGESEKAIR
QIFRRARQVAPAIIFFDEIDAIAPARGYRHDTSGVTDRIVNQLLTEMDGIEPLTNVVVIA
ATNRPDILDPALLRPGRFDRLIYVPPPDKKARLEILKIHTRKMPLAEDVDLEAIAEKTEG
YTGADLEALCREAAMLAVRESLEKTGKPTATVVRMKHFEKALQVIQPSLTPEDIRRYEKL
AKELKRMVI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaagtgagattgagcttcgtgttgctgaggctcgtagcagggatgttggcagaaag
attgcacgtatcagccgggatgctatggcgcgactcggcgtagaagtcggcgacttcatt
gagattgaggggcctaagggtattgctgttgcccaggtgtggccccttcaccccgacgaa
gaccccaacattatcaggatcgacggcttcataagagaagctattggcgctagtgtcggc
gacacggtgagggttaggagagcagccaacgtacagccagcaacacgcgtagtgctagca
cccacggagcctatgaggtttagcagagactttgtagaatacgtgaaagactacctgctg
agaaagccgcttgcacgaggagaaacaataatcataccgttcttcggagcagggctcaga
ctagtagtagtagcgactcagcctggacaattcgtatacgtgacagatcagacacagcta
gagataagagaagaaccggttaaggaggagcagctacgccgccgcggaataccgagggtt
acatgggaggacataggtgatctagaggaagcaaaggagaagataagagagatagtagag
ctgccgatgaaacacccagaactcttcaagcacctaggcatagagcctccaaagggtatt
ctcctctatggcccgcctggtgttggtaagacactactagcgaaggcccttgctaacgag
atcggcgcttactttattgcgattaacggcccagagataatgagcaaatactatggtgag
agcgagcaaaggctaagagaaatattcgaagaagccgagaaaaacgcgccatcaataata
ttcatagacgagatagacgcgatagcacctagaagagaagaggttacgggcgaagtagag
aaacgtgtcgtagcacagctgctaacactaatggatgggctcaaggagcgaggcagagta
atagtaatcggcgcaaccaataggcccgaggctcttgacccggcactcaggcgcccaggg
cgcttcgatagagagatagagattcgtccaccagataagcgagctcgtaaggagattctc
caggtacatgttaggaacatgcctcttgccgacgatgttgatcttgataagattgctgag
atgactcatggctatactggcgcagacctggcagcgttggcgaaggaggctgcgatgaac
gcgctacgccgcttcatcaagagcggcaaaatagacctaaacaaaccaataccggcagaa
gtactcaaagaactaaaagtaacaatggcagacttcatagaggcaatgaagtatgtgcag
cccagcctcataagggagatctatattgaggttcctgaggttcattgggaggatattggt
gggttagaggatgttaagcagcagttgcgcgaggcagtagaatggccgctgaagtatccc
gaagtcttcgagcagatgggtattaggccgcctaagggtatcttgttgtttggtcctcct
ggtactggtaagactatgctcgctaaggctgctgcaacagagagcggagccaacttcata
gcagtaagaggaccagaaatactaagcaaatgggtaggagaatcagaaaaagcaatccgt
cagatattcaggcgtgcaagacaagttgcgccagcaattatattcttcgacgaaatagac
gcaatagcacctgctagaggttatcgtcacgatactagcggtgtgaccgacaggatagtg
aaccaattgttgactgagatggacggcatcgagcctttgacgaacgtagtggttattgct
gctactaataggcctgatatcctcgacccggcgctgctaaggccaggaagattcgataga
ctcatctatgtgccgcctccagacaagaaagcaagactagaaatactcaaaatacacaca
agaaaaatgccactagcagaagacgtagaccttgaagcaatagccgagaagacggaaggc
tatacaggcgcggatctagaggcgctttgccgcgaggcagcaatgttagccgttagagag
agcctcgaaaaaactggcaagccgacagcgacggttgtcagaatgaagcacttcgagaaa
gcattgcaggtaatacagccaagcctaacgccagaggacattaggcgctacgagaagctc
gctaaggaactaaagagaatggttatctaa
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