Pyrofollis japonicus: PYJP_06140
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Entry
PYJP_06140 CDS
T09484
Name
(GenBank) hypothetical protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
pare
Pyrofollis japonicus
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pare02048
]
PYJP_06140
Enzymes [BR:
pare01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
PYJP_06140
Prokaryotic defense system [BR:
pare02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
PYJP_06140
Subtype I-B factors
PYJP_06140
Subtype I-C factors
PYJP_06140
Subtype I-D factors
PYJP_06140
Type II CRISPR-Cas system
Subtype II-B factors
PYJP_06140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
DUF5443
Motif
Other DBs
NCBI-ProteinID:
BEP17262
LinkDB
All DBs
Position
613513..614121
Genome browser
AA seq
202 aa
AA seq
DB search
MLSSSLVEDVLIPIGLVKEYYWCPMEAYFKLMAWREAPTESMMAGAEIVPRDRIVELLEE
RHRVHELLWEHPVVSRRLRLGGRVDLVAITVNDAVVVVEAKLSKTSRRALRGRDKRLLIQ
LAAYAIAAEEALRLPLEAAYVYSTEVDKLIEAKITPLLRRLVEHAAKELRRMLLEAKPPE
TVRTNRRRCRVCSYRHVCPFAR
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
ttgttgtcgtctagccttgtcgaagacgttttgatccctatagggcttgttaaggagtat
tattggtgccctatggaggcttatttcaagcttatggcttggcgcgaggcgcctacggag
agtatgatggctggtgctgagattgttccgcgtgaccgtatagtagagctgctggaggag
aggcacagagtccacgagctactgtgggagcacccggttgtttcacgtaggcttagactt
ggtggacgcgttgacctcgtagctataaccgttaacgatgccgttgttgtggttgaggct
aagctctcgaagactagtagaagggctctccgggggagagataagaggctactaatacag
ctggcagcctatgctatcgccgccgaggaggcgctccgccttcccttggaggccgcctat
gtctatagcacggaagttgataagctaattgaggccaagattacgccgcttctccgccgc
ctagtagagcacgcagccaaagagcttagaagaatgcttctcgaagctaagccgccggaa
acagttagaactaatagaaggcgttgcagggtctgcagctatcgccacgtatgccccttt
gcgcgctaa
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integrated database retrieval system
