Pyrofollis japonicus: PYJP_09200
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Entry
PYJP_09200 CDS
T09484
Symbol
rad50
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pare
Pyrofollis japonicus
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pare03400
]
PYJP_09200 (rad50)
DNA repair and recombination proteins [BR:
pare03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PYJP_09200 (rad50)
Archaeal homologous recombinant proteins
PYJP_09200 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Rad50_zn_hook
AAA_15
AAA_21
ATG17_like
SbcC_Walker_B
AAA_29
ABC_tran
AAA_27
BLOC1_2
CENP-F_leu_zip
DUF6447
ABC_ATPase
DUF3892
COG4_N
DUF1664
Goodbye
DUF6011
Dynamin_N
DUF3090
Motif
Other DBs
NCBI-ProteinID:
BEP17568
LinkDB
All DBs
Position
complement(916954..919686)
Genome browser
AA seq
910 aa
AA seq
DB search
MIIERVELENVLSHRKSTIDLGKGIIAIVGPNGAGKSSIIDAISYAFFGTHSRDPRNKKE
TIIRLGAHYARIIIDFISNGRYYRIQKTISRHGRTDTKLIEIIDGKPAVIATSPSTVASE
LRKIIGIDPQIAEKLIITRQGQIEEILINKDKRIELIDTILRLKAVEKAFDRIADITRTA
RKILQDRERLLQREKQRLEVLRSEIAKSREIEEALARKKPLLHEKEQRLSALKSELDEST
GRLISLEKTIEMIENKKKDLEVLIKDLEAVEKELAEARKASIRLEELKKKREQIEMKTEL
VRILSDLELFERERRRLKERIKELENEVKELDELEPKVKEYEELLRIIEDKKDIEDKYRY
IESEISRLKNKINEITSLIENETQRVMDKAKHYLPFEPPNDINAISDAVKTLLDALRRQE
ENLRQKEKTIQSLIASATTRIRELEDKLLKLTTARGVCPLCGRPLSDDERVKLIARLRDD
KRRLENELLQLQRKGNEIESQLAKVSELRNEIEALLQDVEVTVRSIRLRQQELSELNSRL
RELKSSLLEVYAAYKEYKEAKDRAERLHEYVVRYQVLIRRAKDLERYKEDLEKLEASISS
LVLRAREILDRLGLREPPQRSQLEEEIRQYMEEVARVSSVAQKLPELERRQKLLMDRINS
IKKEIEALDQLREEYERLRKYVEAKREELSLLEREVRGLYSEVAELDARLRVIKEREKEF
KEAMEKIREIEEYVEKYRKVINVLEKIRRALSPNGIPRIIREAARNRLEQCLRDILYAFN
IDFTDIRLDEDYNVYVVTRNGEKSVQMLSGGERIALAIAYRLAIARLVGESIETLIMDEP
TVHLDEEKRRELINIIRYGLESTGLAQLVVITHERELEEAADKVIEVQQVNGVSKVLERT
PGSQALLVES
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
ttgattattgaaagggttgaattagagaatgtgctaagccatagaaagagcactatagat
ctcgggaaaggaattatagctattgttggtccgaatggtgcaggcaagtcgagcattata
gatgctatatcatatgcgtttttcggtacgcatagcagggatccgcgcaacaagaaagaa
actataatccggctaggcgcacactatgctagaattataatagatttcatcagtaatggg
cgttactaccgcatacaaaagactatatcaaggcatggacgcaccgatactaagctcatt
gagatcattgacggaaaaccagcagtcatagctacttctccttctacggtagcctcggag
ctaaggaaaataataggcatagatccccaaatagccgagaagttgataataacaaggcag
ggtcagatagaagaaatactaattaataaggataagcgaattgaactaatagataccatt
ttaaggctcaaggctgttgaaaaagctttcgatagaatagctgacattacccgtacagca
aggaagatacttcaagacagagaacgattgctccaaagagagaagcaaaggttggaggtt
ctccgctccgagattgcaaagtctagagaaattgaggaggctttggctagaaagaagcca
ttgcttcatgaaaaagagcagcggctctcagcgcttaagagcgagcttgatgaaagcaca
gggcgattaataagtcttgagaaaactatagaaatgatagagaataaaaagaaggacctt
gaggtacttatcaaggatctcgaagctgttgaaaaagagctagctgaggcccggaaggca
tctattcggctcgaagaactgaaaaagaaacgtgaacaaatagaaatgaaaaccgagctg
gttagaatcttaagtgatttagaattatttgaaagggaaagacggcggctaaaggagcgt
ataaaagagcttgagaacgaagttaaggaactagatgagctagaacctaaagtaaaagaa
tacgaagaactattaaggattatagaggataagaaagatattgaggacaagtatcgctat
atagagtcagaaataagtagattgaagaataaaataaacgagatcacaagtctaatagag
aacgagacacagcgggttatggataaagctaagcattatctccccttcgagccgccaaac
gacataaacgcgattagtgatgctgttaaaactctccttgatgcactaagacgccaagaa
gagaaccttaggcagaaagaaaagacaattcaatctctcattgcaagtgcgacgacgagg
attcgtgaactagaggataaattgctaaagctaacaacggcgcgaggagtatgcccgctt
tgtggcagaccgctaagcgacgatgaacgtgtaaagctaatagcgaggctacgcgatgat
aagagaaggcttgagaacgaattattacaacttcaaagaaaaggtaatgagatagaatct
cagctggcaaaagtaagcgagctaagaaacgaaatagaagcacttctacaagacgtagaa
gtaaccgtaagatcgataaggcttcgtcaacaagagctaagtgagcttaattcgcggcta
cgtgaactgaagtcttccctcttagaagtatatgctgcttacaaggagtacaaggaggca
aaggatagggcggagaggcttcacgaatatgtagtgagatatcaagttcttatacgaaga
gcaaaagacctcgaaaggtacaaagaagatttggaaaaactagaagcaagtataagttca
ctagtacttagggctcgcgaaatccttgaccgtctaggactaagggagcctccccaaagg
agtcaactagaggaagagattagacaatacatggaagaggttgcaagagtaagctcagta
gcccagaagcttccggaacttgagagaaggcagaagctcttaatggatcgtattaattct
attaagaaagagattgaggctcttgaccagcttagagaagaatatgaacggcttcgcaaa
tatgttgaggcaaagcgtgaagaactttcattacttgaaagagaagttaggggattatac
agtgaagttgcagagctggatgcaaggctgcgcgtaattaaggaacgcgagaaagagttc
aaagaagctatggaaaagataagagaaattgaagaatatgtggaaaagtacagaaaagta
ataaacgtacttgaaaaaatacgtagagctttgagcccgaatggaataccgaggataatt
agggaagctgcgagaaaccggcttgaacagtgtctacgagacatactatatgcctttaac
atagacttcaccgatatacggcttgacgaggattacaatgtctatgttgtgaccaggaat
ggtgagaagagtgtacagatgcttagcggaggtgaacgcatagccttagcgatagcatat
agactcgctatagcgcggttagttggtgagagtatcgagacgttaatcatggatgagcca
acggttcaccttgatgaggaaaaaaggagagaattaatcaacattatacgttatggatta
gaatcaacgggtcttgcccagttggtagtaattactcatgaaagagaactagaggaagca
gcagacaaggtaattgaggttcaacaagtaaatggtgtgagcaaagtcttagaaagaact
ccgggttcacaagctctgctcgtagagagttaa
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