Pyrofollis japonicus: PYJP_09550
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Entry
PYJP_09550 CDS
T09484
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
pare
Pyrofollis japonicus
Pathway
pare03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PYJP_09550 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pare03019
]
PYJP_09550 (prf1)
03012 Translation factors [BR:
pare03012
]
PYJP_09550 (prf1)
Messenger RNA biogenesis [BR:
pare03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PYJP_09550 (prf1)
Translation factors [BR:
pare03012
]
Eukaryotic type
Release factors
PYJP_09550 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
baeRF_family10
eRF1_1
acVLRF1
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
BEP17603
LinkDB
All DBs
Position
complement(948553..949662)
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AA seq
369 aa
AA seq
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MSAARLEIDKTTLKKIIRELKKWKAPATVLLSLYIPPGRPISDVVNLLRTEYSITDNIKL
KRTRDAVQRALAAAIDRLSKVQKVPENGLVLFCGQDMDTNEFICLMFSPPEPVPVFFYRT
DKWFHTEFLEEMVESDEVYGLVIVERDEATIGILKGSRIQVLEELEGYVPGKHHRGGQSQ
RRFDRQIEQFVKGFYQEVAQAMNKHFLPFIEKGKLKAIIIGGPAYAKQDFLKEAKDFLDY
RVRQKIASQTVDVAYQGEAGLRELVIRAADIIEKNKYAELHKAIEEFKLHLAKDDGLAIY
GDRDIKTALEMGALKFIVVDEERHDAEQLAEEAKKYGTEVYILTGDFPEAEWIRKTFKGL
VGVLRFKLY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggcaaggcttgagatagataagaccacgctgaaaaagattataagagagcta
aagaaatggaaggcgccagcaaccgttctgctaagcctatatattccgccggggaggccg
ataagcgatgtagtaaacctgctccgaacagaatactccataactgataacattaagctg
aaacgaacccgtgacgctgttcaacgagcattagcagccgctattgataggctatcgaag
gtccaaaaggttccagagaacggcctagtactgttctgcggccaagacatggatactaac
gaattcatatgcttaatgttctcaccgccagaacctgtacctgtgttcttctatagaacc
gataaatggttccacaccgagtttcttgaagaaatggttgaaagcgacgaagtatacgga
ctcgttatcgtagaaagagatgaagcaacaataggtattctcaaaggaagcaggatacag
gtactcgaggagctagagggctatgtaccaggcaagcaccaccgaggaggccagagccag
aggcgtttcgatagacaaattgagcaattcgtgaaaggcttctaccaggaagtagcacag
gcaatgaataaacacttcttaccattcattgagaaaggcaagcttaaagcaataataata
ggcggcccagcatacgctaagcaagacttcctcaaagaagcaaaggactttctcgactac
cgcgtaaggcagaagatcgcctcgcagaccgttgacgtcgcataccagggcgaggcaggg
ctccgcgaactcgtaataagggccgcagacatcatagaaaagaacaagtatgccgaacta
cacaaggctatagaagagttcaaactccacctagcaaaagacgatgggctagcgatatac
ggtgaccgcgacatcaagacagcactagagatgggagcattaaagtttatagtcgttgac
gaggaaaggcacgacgcagaacaactcgctgaagaagcgaagaaatatggaaccgaggta
tacattcttacaggcgatttccctgaagccgagtggataagaaagacattcaaaggtctc
gtaggcgttctacgcttcaaactctactag
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