KEGG   Pyrofollis japonicus: PYJP_13360
Entry
PYJP_13360        CDS       T09484                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pare  Pyrofollis japonicus
Pathway
pare03030  DNA replication
pare03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pare00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PYJP_13360 (fen)
   03410 Base excision repair
    PYJP_13360 (fen)
   03450 Non-homologous end-joining
    PYJP_13360 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pare03032]
    PYJP_13360 (fen)
   03400 DNA repair and recombination proteins [BR:pare03400]
    PYJP_13360 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pare04147]
    PYJP_13360 (fen)
DNA replication proteins [BR:pare03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PYJP_13360 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PYJP_13360 (fen)
DNA repair and recombination proteins [BR:pare03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PYJP_13360 (fen)
Exosome [BR:pare04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PYJP_13360 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 DUF8630
Other DBs
NCBI-ProteinID: BEP17984
LinkDB
Position
complement(1301211..1302266)
AA seq 351 aa
MGVNIREIIPPEAIKTIELSFLKYKVVAIDAYNALYQFLTAIRQPDGTPLMDSKGRITSH
LSGLFYRTINLVENGIKVVYVFDGQPPEMKYAEIERRKKIKSEAIKKYEEAVKKGDIEAA
RRYAQMSSRLTEDMVNDAKKLLEAMGIPYVQAPAEGEAQAAFMARKGDAWAAASQDYDSL
LFGAPRLVRNLAITGKRKLPRKDVYVEIKPELIELEVLLKALGITREQLIAIGILVGTDY
NPDGVRGIGPKTALKMVKAHKDPVKLLQSLPKHEFPVDPVKIYEYFLNPPVTSDYKLEWR
EPDEKKVFEILVEEHDFNPERVKNALERLKKAYREHIKGKQTGLDAWLRKR
NT seq 1056 nt   +upstreamnt  +downstreamnt
ttgggagtaaacattagagagataataccgcctgaagccataaagacaatcgagttatcg
tttctcaaatacaaggttgtagccattgatgcctataacgccctttaccagttcttgaca
gccataaggcagccagatggtactccgttaatggattccaaggggcgcataacaagccat
ctaagcggcttattctataggacgataaacctggttgagaatggtattaaggtagtatat
gtctttgacggccagcctcccgaaatgaagtatgccgagatcgagagaaggaagaaaata
aaatcagaggcaataaagaagtatgaggaagccgtgaagaagggagacatagaagctgcg
agaaggtatgcacaaatgtcatcaagactcaccgaggacatggtgaatgatgccaagaag
cttctcgaggcaatggggataccctacgtccaggctccagcagagggcgaggcacaggca
gcatttatggcgcggaaaggcgacgcgtgggcagcagctagccaagactacgattcactg
ctgtttggtgccccaagacttgtacgcaacctagctataaccggtaagagaaaactgccg
cgaaaagacgtgtacgtcgagataaagccagagctaatagagcttgaagtgcttcttaaa
gcactaggcattacacgggagcagttaatagcaataggtatactggttggtaccgactac
aatcctgatggcgtcagaggaattgggccgaagactgctctaaaaatggtgaaggctcac
aaggacccagttaaactgctacaaagtctacctaagcacgagttcccagttgaccctgta
aagatttatgaatacttcctcaacccgccagttactagcgattacaagctagaatggagg
gagcccgacgagaagaaggtcttcgaaatactcgtagaggagcatgactttaaccctgag
agggttaaaaacgcgctcgagaggctaaagaaggcttaccgtgagcatattaagggtaag
caaaccgggcttgatgcttggctgcgtaaacgctaa

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