Pyrofollis japonicus: PYJP_13380
Help
Entry
PYJP_13380 CDS
T09484
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pare
Pyrofollis japonicus
Pathway
pare04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PYJP_13380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pare03019
]
PYJP_13380
03009 Ribosome biogenesis [BR:
pare03009
]
PYJP_13380
04131 Membrane trafficking [BR:
pare04131
]
PYJP_13380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pare04147
]
PYJP_13380
Messenger RNA biogenesis [BR:
pare03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PYJP_13380
Ribosome biogenesis [BR:
pare03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
PYJP_13380
Membrane trafficking [BR:
pare04131
]
SNARE
SNARE associated proteins
Others
PYJP_13380
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PYJP_13380
Exosome [BR:
pare04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PYJP_13380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_14
AAA_22
TIP49
AAA_lid_PRS2_C
AAA_33
IstB_IS21
nSTAND3
AAA_28
AAA_24
Vps4_C
Mg_chelatase
AAA_18
RNA_helicase
NPHP3_N
ATPase_2
ABC_tran
Sigma54_activat
AAA_7
Parvo_NS1
DUF815
TsaE
AAA_17
Zeta_toxin
NB-ARC
AAA_25
ATPase
NACHT
AAA_3
PhoH
Bac_DnaA
HEPN_SAV_6107
Asp_decarbox
Motif
Other DBs
NCBI-ProteinID:
BEP17986
LinkDB
All DBs
Position
complement(1302781..1304991)
Genome browser
AA seq
736 aa
AA seq
DB search
MAITGSRRRKEIVLRVAEAKQRDVGKGKVRIDPDLLKMIDAEPGDVVEIEGRKKTAAIAL
PAYPEDRGSDIIRMDGLIRKNAGVSIGDKVIVRKAEVKPAALMKLAPANFSITIDAGFVN
YVRKKLIEYPVVEGDTVLIPVLNQSIPFVVIQTKPQGVVVVTYDTNIVVLEKPVEQGRIP
RVTYEDIGGMKDIIQKVRELVELPLKHPEVFKRLGIEPPKGILLYGPPGVGKTLLAKAIA
NETNAYFIAINGPEIMSKYYGESEQRLREIFEEAKKHAPAIIFIDEIDAIAPKRDEVIGE
VERRVVAQLLALMDGLESRGEVIVIAATNRPNALDPALRRPGRFDREIEIPLPDKQGRLE
ILQIHTRNMPLADDVDLERLAEMTRGYTGADLAALVKEAALHALRRYLPKIDLSEDRIPP
EVLEEMEVRMEDFMSALREIVPSGLREIYIEVPEVHWEDIGGLEDVKQQLREAVEWPLKQ
PEIFRRMGIEAPKGILLFGPPGTGKTMLAKAAATESGANFIAVRGPEILSKWVGESEKAI
REIFRKARLHAPAIIFFDEIDAIAQTRGFYDTSGVTYRIVNQLLAELDGIEPLTNVVVIA
ATNRPDILDPALLRPGRFDKIIYVPPPDKKARLEILKIHTRKMPLAEDVDLELLALKTEG
YSGADLAALCREAAMLALREDINATRVHMRHFLKALEIIRPSITQDMVKFYEDWYKQARQ
QLPGSKLVQAKPLIFT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaccgggtcgcggaggaggaaggagatcgtactaagagttgctgaagcgaag
cagcgtgatgttggcaagggaaaggtgcgtattgaccccgacctcctaaagatgatagat
gctgagccaggcgatgtcgtcgaaatagagggtcggaagaagactgcagccatagcgctt
ccagcgtatcctgaggacagaggatcagatattatccgcatggacggccttataaggaag
aacgcgggggtcagcattggagacaaggtcatagtgagaaaggccgaggtaaaaccagca
gcactaatgaagctagcgccagcaaacttctcaataaccatagacgctggatttgttaac
tatgttagaaagaagctcatagaataccctgttgttgaaggcgataccgtactaatacca
gtgctgaatcagtccataccgtttgttgttatccagacaaagcctcaaggagtagtcgta
gtaacatatgacactaatatcgtggtgcttgagaagccggtagaacagggtaggattccg
cgagtaacctacgaagacattggtggaatgaaggatattatccaaaaggtaagagaacta
gtagagcttccattgaagcacccagaggtattcaagaggcttggcatagagcctccaaag
ggtattctcctctatggcccgccgggtgttggtaagacgctgctggcgaaggcaatagct
aatgagacaaacgcttactttattgccattaacggtccggagataatgagcaaatactat
ggtgagagcgagcaaaggctaagagaaatattcgaagaggcaaagaagcatgctccagca
ataatattcatagacgagatagacgcgatagcgcctaagcgagacgaagtcataggtgag
gtcgagaggagagtcgttgcacaactgttagctctaatggatgggctcgagagcaggggc
gaggtaatagtcatagctgcaaccaataggccaaatgctcttgaccctgcactgcgcagg
ccgggaagatttgacagagagatagagatcccgttacctgacaaacagggtaggctcgag
atattgcaaatacacactcgcaacatgccgttagccgacgacgtagaccttgagcgactc
gctgagatgacccgcggatacacgggtgcagaccttgcagcgctagtcaaggaggctgca
ctgcacgctctccgccgctacttgccaaagatagacttgagcgaggacaggataccgcca
gaagtactcgaggaaatggaggtaagaatggaggacttcatgtctgccctccgcgaaata
gtgccaagcggcctaagggagatctatattgaggttcctgaggttcattgggaggatatt
ggtgggttggaggatgttaagcagcagttgcgcgaggcagtagaatggccgctcaaacag
ccagagatattcagaagaatggggatcgaggcacccaagggtatcttgttgtttggtcct
cctggtactggtaagactatgctcgctaaggctgctgcaacagagagcggagccaacttc
atagcagtaagaggaccagaaatactaagcaaatgggtaggagaatcagaaaaagcaatt
agagaaatcttccgcaaagcaaggctccacgcacctgcaattatattcttcgacgagata
gacgcaatagcgcagacgagaggcttctacgacaccagcggcgtgacataccgcatagta
aatcaattgctcgcagaacttgacggaatagaaccgctgactaatgtcgtggttattgct
gctactaataggcctgatatcctcgacccggcgctgctaaggccaggaagattcgacaag
ataatttatgtgccgcctccggacaagaaagcaagactagaaatactcaaaatacacaca
agaaagatgccattagcagaagacgtagacctagaactattagcgctaaagactgaaggc
tatagtggcgccgaccttgcagctctctgccgcgaggcagcaatgcttgcgctgagagag
gacataaacgcgacaagggtacacatgaggcacttcctcaaggcactagagataataagg
ccgtcaataacacaagacatggtcaagttctacgaggactggtataagcaggcacgccag
cagctacccggaagcaagcttgtacaggcaaagccactcatattcacataa
DBGET
integrated database retrieval system
