Pyrofollis japonicus: PYJP_13420
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Entry
PYJP_13420 CDS
T09484
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pare
Pyrofollis japonicus
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pare03016
]
PYJP_13420 (truD)
Enzymes [BR:
pare01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PYJP_13420 (truD)
Transfer RNA biogenesis [BR:
pare03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PYJP_13420 (truD)
Prokaryotic type
PYJP_13420 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BEP17990
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All DBs
Position
1306325..1307494
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AA seq
389 aa
AA seq
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MDYFRPSPWSLDYLLGLKYIVLDGKPVARIARPRERSFIVREIAPSFFLRDEGSFCVYLV
AKRGLSTHAAVAMLAKALRNHIRGRPRFFGLKDTDATATQYVCIPCKGDPPRHVNLRNIW
ARLIGRTDVCKERPPEGNRFWIILEPLNSPDKIVEKIIDLREKLLPNYYGYQRFGTRRPN
THLLGIALLLGNYVDYADEMINSPYPDEDPESIRCRLVGWSPEACIGSKLYEFTVASESR
CLSDLVKKLPKGIYSVYFSALQAFIYNLYLSKRIEKGVGINEKLSGERIIGNRVYAPVPG
IGYKIGVEGEARQLLRSVLDDIGLSEEEISKPLHKSMRSRPYWRPVYMKPEGLQARKLAD
GKVLIEFSLEHGMYATIVLRELVKIPDGL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttggattattttcgcccttctccctggagcctcgattatcttttagggctcaagtacata
gtgctagacgggaaaccggtagccagaatagctagacctcgagagagaagtttcattgtc
cgcgagatagcaccaagctttttcctgagggacgagggcagcttctgtgtatacctcgtc
gccaaaaggggtctttcaactcatgcagctgtcgccatgcttgcaaaagcccttagaaac
catattagaggaagaccaaggttcttcgggctaaaggataccgatgcaacagcaacacaa
tatgtatgcatcccgtgcaaaggtgacccccccagacacgttaacctaagaaatatctgg
gcaaggcttatagggcgcaccgatgtgtgcaaagagagaccaccagaaggcaaccgtttt
tggataatactagaacctctcaacagccccgacaaaatagtcgagaaaataattgatctt
cgagagaagctccttcccaactactatggatatcaaagattcggcacacgaaggccgaac
acgcatctactcggaatagctctcctactgggtaactatgtagactatgctgacgagatg
attaactctccttatcctgatgaggacccggagagtattcgttgcagactagtaggctgg
agccctgaagcttgtatcggttccaagctatacgaattcactgtggcctcagaatcaaga
tgcctcagcgaccttgttaagaaactgcctaaaggtatatactcggtgtacttctcagcc
ctacaagcattcatctacaacctctacttgtcgaaacgcatagagaaaggagtcggaatt
aatgagaaactgagcggagaaagaatcatcggtaacagagtctatgccccagtgccaggc
atagggtataagataggcgtagaaggcgaggccaggcaattgctaagaagcgttctagac
gatatagggctaagcgaggaagaaatctcaaagcccttacataaatcaatgcgctcaaga
ccctactggagaccagtatacatgaagccagaagggctccaagccaggaagctcgctgat
ggaaaagtattgattgaattcagcctagaacatggaatgtatgctacaattgtgttgaga
gagcttgtaaaaatacctgatggactttag
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