Pyrofollis japonicus: PYJP_13970
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Entry
PYJP_13970 CDS
T09484
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
pare
Pyrofollis japonicus
Pathway
pare03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PYJP_13970 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pare03021
]
PYJP_13970 (rpoA1)
Enzymes [BR:
pare01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PYJP_13970 (rpoA1)
Transcription machinery [BR:
pare03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PYJP_13970 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
BEP18045
LinkDB
All DBs
Position
complement(1353680..1356322)
Genome browser
AA seq
880 aa
AA seq
DB search
MVEEKIIKEIKFGILSPDEIRKMSVTAIVTSDLYDEDGRPVPGGLMDPRLGAIAPGQVCM
TCGNDAKTCPGHFGHIELARPVIHVGFAKHIYDALRATCRRCGRLLLPEEELRRYLTLLN
RLEDRWPLLARLLVTVVKKKASKVTECPHCGERQYKIVFEKPYTYYEDRPEGRIQLTPLE
VRTRLERIPNDDVRLLGLDPQNARPEWMVLTVLPVPPVHVRPSIVLETGIHAEDDLTHKL
ADIVRTNERLRELLDTGAPQTLIDEHWALLQYHVATYIDNELPRIPVARHRGGRPLKGLA
QRLKGKEGRFRGNLSGKRVDYSARTVISPDPNISINEVGVPVEIAKVLTVRVPVTPWNIE
EMRKYVLNGPDKWPGANYVIRSDGRKIDLRYADRKRIAEMLEPGWFVERHLRDGDIVLFN
RQPSLHRMSIMAHIVKVLPGKTFRLNLLVCPPYNADFDGDEMNLHVPRTEEAQAEARELM
LVQYHILSPRYGGPIIGGLQDYISGAYLLTSKATLLSIEDVVDLLSAAGYRGEIPEPAIL
SPKKRWTGKQLVSLFLPKEFNFRGKARVSAGIFACDDEWCWNDSFITIKKGELLTGVLDK
KAIGAEQPENMMHWLIKEYGTDYARYVYDHMFKMFIRFIEKRGFTMTIDDVALPPEAKEK
IREVLKEAERKVYELIEIYKQGKLEPVPGRTLEESLELRILDVLSEARKKVEDITVNYLD
PFNNVFIMARTGARGNELNITQMAALLGQQSVRGERIHRGYLGRFLPHFKPGDLGPAARG
FVYSSFYDGLSPVEVFFHAAGGREGLVDTAVRTSQSGYMQRRLINALQDLRVEYDGTVRT
PYGEVVQFVYGEDGVDPMRSAHGKAVNIDREIERVIGWRV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggaaaagataattaaggaaataaagttcgggattctatctccagacgaaata
agaaagatgtcggtaacagcaatcgtcacaagtgacctctacgacgaagatgggcgacca
gtgcctggaggactaatggatccgcgcctaggtgctattgctccaggccaagtctgtatg
acttgtggaaacgatgcaaaaacatgcccagggcacttcggccatattgagctggcacgc
cccgtaatacatgtaggatttgcgaagcatatctatgacgcactaagggctacttgtcgt
cgttgtggacgccttctcctacccgaagaggagctccgtagataccttacattgttgaat
aggttagaagaccgttggcccctcctcgctcgcctgcttgtaactgtagtaaagaagaaa
gcatcaaaagtgactgagtgtccacactgcggcgagcgccaatacaagatcgtattcgag
aaaccctacacatattatgaagataggcctgagggcagaatacagcttacacctctagaa
gtaagaaccaggctagagcgaatacctaatgatgatgtgcgcttacttgggctcgaccct
cagaatgcacgccccgagtggatggtattaacggttctacctgtgccacctgtacatgtg
cgtccgtcaatagtgctcgagacaggtatccacgccgaggatgacctaactcacaagctt
gcagatatcgtcaggactaacgagaggctccgagagcttcttgacaccggtgcgcctcaa
acgctcatagatgagcattgggcgcttctccagtaccatgttgcaacatatattgacaac
gagcttccaagaatacctgtcgcaagacatcgcggcggtagacctctcaaaggcttagcg
cagcgacttaagggcaaagagggcagatttcgcgggaaccttagcggcaagcgcgtagac
tactcagctcgtacggtgatttcgcctgacccaaacattagtataaacgaggtaggagtt
ccagtagaaatagccaaggtgctaacggttcgtgttccagtaacaccttggaatatcgaa
gaaatgaggaaatatgtcctaaatgggccggacaagtggccaggcgcaaactacgtgata
agaagtgacgggcgcaaaatagacctaagatatgctgataggaaacgtatagccgaaatg
cttgaacccgggtggtttgttgaacgacatctacgcgatggagacatagttctattcaat
cgacagccaagccttcaccgaatgtcgataatggctcacatagtcaaagtactaccaggc
aagacgttccgcctaaacctactggtgtgcccaccatataacgcagacttcgacggcgac
gagatgaacctgcatgtcccacgcacagaggaagcacaggcagaagcaagagagctaatg
cttgtacaataccatatactatcaccacgctacggtggcccgataattggcggacttcaa
gactatataagcggggcatacctgctaacaagcaaggccacgctcctctcaatagaggat
gttgttgatctactctccgcggctggctatcgtggtgaaataccagagccagccatactc
tcgccgaagaagaggtggacaggtaaacagctcgtcagtctcttcctgccaaaagagttt
aactttagaggaaaggcacgagtgtctgccggcatcttcgcctgcgatgacgagtggtgc
tggaacgattcattcataacaatcaagaagggtgaacttctaacgggtgtgctcgacaag
aaagccattggtgccgagcagccagagaacatgatgcactggctcataaaggagtatggt
actgactatgcgcgctacgtatatgaccacatgttcaagatgttcatacgcttcatagag
aaaagaggcttcactatgacaatagacgacgtggcgctcccgccagaggctaaggagaag
atccgagaggtcttgaaagaagctgaaagaaaggtatacgagctgatagaaatctacaag
caaggcaaacttgaacccgtacctggaaggaccctagaagagtctcttgaacttagaatc
ctagacgtcttatcagaggcgcgtaagaaggttgaagatattaccgttaactatctagac
ccgttcaacaatgtcttcataatggcccgtacaggtgctcgtggaaacgagctaaacata
acacagatggcagcactcctaggccagcagtcggtcagaggagaaagaattcacagaggc
tacttgggccgcttcctgccacacttcaagccaggtgatctgggccctgcggcacgaggc
tttgtctactctagcttctatgacggattatcgcccgttgaggtattcttccacgctgca
ggtggccgcgaaggccttgtcgacactgctgtgcgtacatcacagagtggctacatgcag
cgccgcctcataaatgcactacaagaccttagagtagagtatgacggaactgtgcgcaca
ccttatggtgaggtcgtgcagttcgtctatggcgaggacggagttgaccccatgaggagc
gcacatgggaaggctgttaacattgatcgtgaaatagaaagagtaattgggtggagggtc
tag
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