Pyrofollis japonicus: PYJP_15410
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Entry
PYJP_15410 CDS
T09484
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pare
Pyrofollis japonicus
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pare03016
]
PYJP_15410 (endA)
Enzymes [BR:
pare01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PYJP_15410 (endA)
Transfer RNA biogenesis [BR:
pare03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PYJP_15410 (endA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
BEP18189
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All DBs
Position
complement(1483713..1484288)
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AA seq
191 aa
AA seq
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MASSEVLEKKRIKGRLLGLRVIIFDVEAAQSLYKAGFYGKPLGIPKPRSVDFNAPLELSL
VEALYLLENNIIEIIDENNNKVDKNSLIKRAESMVPRFRLIYKVYKELRDQGYIVRSGLK
FGADFAVYEKGPGIEHAPYLVHVLNALESIDPLDIVRAGRLSHSVRKAFIIAIAGPGETK
TRYLMFRWSKL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttggcttccagcgaggtattagagaagaagaggataaagggcagacttctaggattgcgt
gttataatatttgatgttgaggcggctcaaagtctctataaggcgggattctatggtaag
cctctcggtatacctaaaccaaggagcgtggattttaatgctcctctcgaactcagtctt
gttgaagccttatatctcctagaaaataatattattgaaataatcgatgaaaataacaat
aaggttgacaaaaatagtctgattaaacgagccgagtccatggtgccgagatttagactg
atatataaggtatacaaagagcttagggatcaaggctatattgtacgctcggggctcaag
ttcggagcagatttcgccgtctatgaaaaagggccaggcatagagcatgctccatacctt
gtacatgtactcaatgcactggaatctatagatcctttagatatagttagagctggaaga
ctgagccatagtgtacgaaaagcatttataatagcgattgcaggtcccggtgaaaccaag
acgaggtacttaatgtttaggtggagcaagctctaa
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