Pyrofollis japonicus: PYJP_15500
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Entry
PYJP_15500 CDS
T09484
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pare
Pyrofollis japonicus
Pathway
pare03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PYJP_15500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pare03021
]
PYJP_15500
Transcription machinery [BR:
pare03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PYJP_15500
Prokaryotic type
Archaeal type
TFB
PYJP_15500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
GerE
HTH_AsnC-type
HTH_Tnp_ISL3
Cyclin_N
HTH_24
FIMAH
Motif
Other DBs
NCBI-ProteinID:
BEP18198
LinkDB
All DBs
Position
1491594..1492532
Genome browser
AA seq
312 aa
AA seq
DB search
MSEDILHKEGHEEQRHSECPPEYIVFDEERGEYICTLTGEVVEETVIDSGPEWRAYTPEE
KTRRSRVGSPLTHTLPDYGLLTTISSYRDATGRKLEARVRLEASRLRRLQAKLRAATSIE
KNIEQAVREITRFVDALNLPRSIIDTAMMIYRQAAEKGLVRGRSLESMAAAAVYAACRIR
GIPRSIDDIAELVKGGRKEVARCYRLIVRELKLRMPIVDPIRYVSRIVSALRLSPAVERR
AAEILMQARRMGLTAGKDPAGLAAAAIYIAALELGERRTQKEIAAAAGVTEVTVRNRYKE
LVQKLNIPLPAQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaggatattctccacaaggaggggcacgaggagcagcggcatagtgagtgcccg
cctgagtatattgtcttcgacgaggagcgcggcgagtacatttgtacgcttaccggagaa
gtcgttgaagaaactgtaatagatagtgggcccgagtggcgtgcgtacacgccggaggag
aagacccgtagaagccgtgtcggaagtcctctaacacatacccttcctgactacggcttg
ctaaccactatttcaagttatcgtgacgctactgggcgtaagcttgaagcccgcgtgagg
cttgaagctagtaggctaagaaggctccaagcaaaactacgtgcagctacgagcattgaa
aagaatattgagcaagctgtgcgcgagataacgagattcgttgatgcactcaatcttcca
agaagcataattgacacggctatgatgatttacaggcaggctgcagagaaaggccttgta
aggggccgaagcctagaatcaatggctgctgcagcggtatatgctgcttgccgtattagg
ggtataccgcgcagcattgatgacatagcggaactcgttaagggtgggcgcaaagaggtt
gcaaggtgctataggcttattgtgcgcgagttgaagctgcgtatgccgatagttgatcct
attaggtatgtatctagaatagtttcggctctcaggctcagcccggctgttgagcgccgt
gctgcggagatactaatgcaggctcgcagaatgggtctaacagctggcaaggatccagca
ggattagcagccgctgcgatctacatagcggcgctagaattaggtgagaggaggacgcag
aaggagatagcagcggccgctggtgtaaccgaggtgaccgttcgcaataggtacaaggaa
cttgtccagaagctcaatatacctctgcctgcccaataa
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