Pyrofollis japonicus: PYJP_16030
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Entry
PYJP_16030 CDS
T09484
Symbol
udg
Name
(GenBank) type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pare
Pyrofollis japonicus
Pathway
pare03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pare00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PYJP_16030 (udg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pare03400
]
PYJP_16030 (udg)
Enzymes [BR:
pare01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PYJP_16030 (udg)
DNA repair and recombination proteins [BR:
pare03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PYJP_16030 (udg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BEP18251
LinkDB
All DBs
Position
1545038..1545712
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AA seq
224 aa
AA seq
DB search
MPVSKDIEDAYKKLVEEIMNCTKCRLHRYRTNPVPGEGPLDTDVMVVGEAPGRNEDLQGR
PFVGAAGQLLNKLLLDAGLRREEVYITNIVKCRPPGNRDPKDDEISACLPYLLRQIELIK
PKLIIALGRHAARVLLEQAGHKWHSMSKQHGHVYDGVISGVRLRIVVTYHPAAALYRPQI
REALEKDFAEVIRREVERIRRPSSGEKRGSSQARQTSLLDFFKK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgtatccaaggatatagaagatgcttacaaaaaactcgtagaagaaataatgaac
tgcaccaagtgtagactgcacagatatcgcaccaaccctgtgccaggggagggcccgctc
gataccgatgtaatggttgttggagaggctcctggacgcaacgaggatttgcaaggaagg
ccatttgttggcgcagctggccagcttttaaacaagttactccttgatgcggggcttcgc
agagaagaagtatacataacaaatattgttaaatgccgtcctccaggcaaccgtgaccct
aaggacgacgagataagcgcatgccttccatacctcctgaggcagatagaactcatcaag
ccaaagctaataattgcgctagggagacacgctgccagagttctgcttgaacaagccggc
cacaaatggcatagtatgagtaagcagcatggccacgtctatgacggcgttatttctggt
gtgagattgcgcatagttgtaacttatcatcctgcagcggcgctatataggccgcagatt
agggaagcgttggaaaaagactttgcagaagtcatacgaagagaggtcgagagaataaga
agacctagcagtggagagaagaggggcagtagtcaagctaggcaaacgagtcttctagac
ttcttcaagaaatga
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