Parageobacillus sp. KH3-4: PspKH34_00130
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Entry
PspKH34_00130 CDS
T08468
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PspKH34_00130 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
parg01007
]
PspKH34_00130 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parg03016
]
PspKH34_00130 (serS)
Enzymes [BR:
parg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PspKH34_00130 (serS)
Amino acid related enzymes [BR:
parg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PspKH34_00130 (serS)
Transfer RNA biogenesis [BR:
parg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PspKH34_00130 (serS)
Prokaryotic type
PspKH34_00130 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ERM_helical
DUF2730
PCRF
DUF3450
GAS
Prefoldin_2
FapA
DUF724
UvrD_C
DUF1664
RNase_Y_N
L_lactis_ph-MCP
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
BDG45452
LinkDB
All DBs
Position
21403..22677
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AA seq
424 aa
AA seq
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MLDVKYLRNHFQEVRERLLKRSGDLANIDRFEELDKKRRELIAKAEELKNKRNEVSQQIA
VLKREKKDADHLIAEMREVGDRIKAMDDEIRRVEEELNALLLSIPNVPHESVPVGKSEED
NVEVRKWGEPRSFSFEPKPHWDIADQLGILDFERAAKVTGSRFVFYKGLGARLERALINF
MLDVHVEEFGYQEILPPYLVNRSSMTGTGQLPKFEEDAFRIETEDYFLIPTAEVPVTNLH
RDEILSAEDLPIYYVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPEDSYDELE
KLTHQAERILQLLGLPYRVVCLCTGDLGFSAAKTYDIEVWLPSYGTYREISSCSNFEAFQ
ARRANIRFRREPKSKPEYVHTLNGSGLAIGRTVAAILENYQQEDGTVVIPEVLRPYMGNK
EVIR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgtgaaatatttacgcaatcattttcaagaagtaagagaaaggcttctaaag
cgcagcggggatttagcaaatattgaccgttttgaagagctcgacaaaaaacgccgcgaa
ttaatcgcaaaagcagaagaactaaaaaataaacgaaatgaagtatcccaacaaatcgcc
gtgttaaaacgagaaaaaaaagatgccgatcatctcattgccgagatgcgggaagtcggg
gatcgcattaaagcaatggatgacgaaatccgccgagtggaagaagaattaaatgcgctg
ttattgtccattccaaacgttcctcatgaatcggtacctgtcggtaagtcggaagaagat
aacgtcgaagttcgcaaatggggggaaccgcgttcgttttcgtttgagccgaaaccgcac
tgggatatcgctgatcagctcggcatccttgattttgaacgggctgcgaaagtaacggga
agccgctttgtcttttataaaggactcggtgcccgcctagagcgcgcgttaattaacttt
atgctcgatgttcatgtcgaagagttcggttatcaagaaatattgcctccgtatcttgtc
aatcggtcgagcatgacagggacagggcaattgccaaagtttgaagaagacgcgtttcgt
atcgaaacagaagattactttttaattccgacggcagaagtgcctgtgactaatttacat
cgcgatgaaattttatcggcggaagatttaccgatttattatgttgcttacagcgcgtgt
ttccgtgccgaagccggtgctgccggacgtgatacaagagggcttattcgtcagcatcaa
tttaataaagtagaacttgtgaaatttgtaaaaccggaagattcgtatgacgaattagaa
aaattgacacatcaagcggagagaattttgcagctccttgggcttccttatcgggttgta
tgtttatgcactggtgatttagggttttcggcggcaaaaacgtatgatattgaagtatgg
ctgccaagttatggaacatatcgtgagatttcttcttgcagcaattttgaagcgttccaa
gcacggcgtgctaacattcgtttccgccgtgaaccaaaatcgaagccggaatatgtgcat
acgctcaacggatcaggattagccattggccgcacggtagctgccattttagaaaattac
cagcaagaagacggcaccgttgtcattccggaagtattgcgcccgtacatgggaaataaa
gaggttattcgataa
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