Parageobacillus sp. KH3-4: PspKH34_00820
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Entry
PspKH34_00820 CDS
T08468
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
parg
Parageobacillus sp. KH3-4
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parg03400
]
PspKH34_00820 (radA)
DNA repair and recombination proteins [BR:
parg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PspKH34_00820 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
AAA_22
Lon_C
Rad51
nSTAND_NTPase5
AAA_16
AAA_24
nSTAND3
AAA
GvpD_P-loop
NPHP3_N
AAA_14
RecA_N
AAA_5
SLFN-g3_helicase
NTPase_1
ATPase_2
ABC_tran
NACHT
AAA_30
divDNAB
MCM
KTI12
ArsA_ATPase
DAP3
AAA_19
CbiA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BDG45521
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All DBs
Position
103144..104517
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AA seq
457 aa
AA seq
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MGKKKTKFVCQECGYESAKWLGRCPGCNTWNSMVEEIERTKPATRGVFVHSAPDIISKPV
PITTVTTTQEPRIQTSISEFNRVLGGGVVKGSLVLIGGDPGIGKSTLLLQVSAQLAALQH
KVLYISGEESVKQTKLRADRLRVAADQLYVLAETDLEYIVEAIETIHPACVVIDSIQTIY
RADIASAPGSVSQVRECTAELMKIAKTKGIAIFIVGHVTKEGAIAGPRILEHMVDTVLYF
EGERHHTYRILRAVKNRFGSTNEIGIFEMRESGLVEVANPSEVFLEERSRGAAGSTVVAA
MEGTRPVLVEIQALVSPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVA
GGVKLDEPAIDLAIAVSIASSFRDQPTNPHDVIIGEVGLTGEVRRVSRIEQRVQEAVKLG
FSRMIIPTNNLAGWNPPEHITVIGVSHVAEALEYTLQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaagaaaacaaagtttgtttgtcaagaatgcggctatgagtcagcgaagtgg
cttggaagatgcccaggatgcaatacgtggaattcgatggttgaggaaatcgagcggacc
aagccggcaacaagaggagtgtttgttcattccgcgcctgatatcatctctaagccagtg
ccgattactacagtgacaacgacgcaagagccgcgcatacaaacgagcatttccgagttt
aaccgcgtattgggcggaggggttgtgaaaggttcgctcgttttaatcggcggcgatccg
gggattggaaaatcgacgcttctattgcaagtttctgcgcaacttgccgctttgcagcat
aaagtattatatatatccggcgaggaatcagtaaaacaaacgaaattgcgcgctgaccgc
cttcgtgttgctgctgaccagctgtatgtattagcagagacagatttggaatatattgta
gaagcaatagaaacgattcaccctgcttgtgttgtgatcgattcgatccaaacgatttac
cgcgcggatattgcgtctgcgcccggaagtgtatcacaagttcgcgagtgcacggcagag
ctgatgaaaatcgccaaaacaaaaggaatcgccatttttattgtcgggcatgtaacaaaa
gaaggagcgattgccggaccaagaattttagagcatatggtggacaccgttctttatttt
gaaggcgagcgccatcatacgtatcgtattttgcgggcggtgaaaaaccgtttcggctcc
acaaatgaaattggtattttcgaaatgagagaatcggggcttgttgaggtcgcaaatcca
tcggaggtgtttttagaggagcgctcccgcggtgcagcaggttcaaccgttgtcgcggca
atggaagggacccgtcctgtgttagtcgaaattcaagcgttagtgtcaccaacgagcttt
ggtaatccgcggcggatggcgacaggaattgatcataaccgtgtttctttattgatggcc
gtattggaaaaaagggtcggtctgcttttacaaaatcaggatgcttacttgaaagtggca
gggggagtaaaattagatgaaccggcgattgatttagcgattgctgtgagcattgcctcg
agctttcgcgatcagcctacaaatccgcatgacgtcattattggcgaagttggtttgaca
ggagaagtacgccgtgtttcccgtattgaacagcgggtgcaggaagctgtaaaattagga
ttttcccgcatgattatccctacaaacaatttagcaggatggaacccgccggaacatata
accgttatcggcgtgtcccatgtcgccgaagcgctggagtatacgttgcagtaa
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