Parageobacillus sp. KH3-4: PspKH34_07450
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Entry
PspKH34_07450 CDS
T08468
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg03030
DNA replication
parg03410
Base excision repair
parg03420
Nucleotide excision repair
parg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PspKH34_07450 (polA)
03410 Base excision repair
PspKH34_07450 (polA)
03420 Nucleotide excision repair
PspKH34_07450 (polA)
03440 Homologous recombination
PspKH34_07450 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parg03032
]
PspKH34_07450 (polA)
03400 DNA repair and recombination proteins [BR:
parg03400
]
PspKH34_07450 (polA)
Enzymes [BR:
parg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PspKH34_07450 (polA)
DNA replication proteins [BR:
parg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PspKH34_07450 (polA)
DNA repair and recombination proteins [BR:
parg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PspKH34_07450 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PspKH34_07450 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BDG46184
LinkDB
All DBs
Position
784136..786769
Genome browser
AA seq
877 aa
AA seq
DB search
MKRKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLMKILEEEKPTHMLVAFDA
GKTTFRHKTFEEYKGGRQKTPPELSEQFPLLRELLNAYQIRFYELENYEADDIIGTLCTK
AENEGFEVKVISGDRDLTQLASDHVTVDITKKGITDVESYTPETVREKYGLTPQQIIDLK
GLMGDKSDNIPGVPGIGEKTALKLLKEFGTIENILDSIEQISGNKLKENLEKHRDLALMS
KQLATILRDAPIDLSLEDIEYRGYDVDKVIALFKELSFNSLLDKMAPQEEETTAVALPEI
GYKIVDEVTEAILSDEAALVVEVLESNYHKAPILGFAIANEHGNFFIRTDTALSSSLFTT
WLEDESKKKSVFDGKRAIVSLKWQGVHLRGIHFDLLIASYLLNPSQSTEDVASIAKTKQY
TGVQSDEAVYGKGAKQKIPDEQILAEHLVRKAAAIRELEQDFIHDLQKNEQYSLFTDLEL
PLSAILAEMEFAGVKVDVERLKEMGEELTEQLKEVEQEIYRLAGQEFNINSPKQLGVILF
EKLQLPVLKKTKTGYSTSAEVLEKLAPQHEIVEKILHYRQLGKLQSTYIEGLLKVVHRDT
NKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSEPDWVIFSADYSQIEL
RVLAHIANDENLIAAFRHDLDIHTKTAMDIFHVNEDEVTPNMRRQAKAVNFGIVYGISDY
GLSQNLNITRKEAAEFIKRYFEIFPGVKQYMKDIVQEAKQKGYVTTILHRRRYLPDITSR
NFNLRSFAERTAMNTPIQGSAADIIKKAMIDLSNRLKQENMKARMLLQVHDELILEAPKE
EIERLQQIVPEVMENAVQLRVPLKVDYHFGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaggaaacttgtactcattgatggaaacagcgtcgcataccgcgctttttttgcg
ctgccgcttttacataacgataaagggattcatacgaatgcggtgtatggatttacgatg
atgctaatgaaaattttagaagaagaaaagccgacgcatatgctcgtcgcttttgatgcc
gggaaaacaacatttcgccataagacgtttgaagaatataaaggaggacggcaaaagacg
cctccggaattatccgagcagtttccgttattgcgggaattgctaaatgcgtaccaaatt
cgtttttacgagttggaaaattacgaagcggacgatattatcggcactctgtgcacaaaa
gcagagaatgaaggatttgaagtaaaagttatctccggagaccgcgatttaacgcagctt
gcctctgatcatgtaaccgtagacattacgaaaaagggcattaccgatgtcgagtcgtat
actccggagacggtgcgggagaaatacggattgacgccacaacaaattatcgatttaaaa
ggactgatgggagacaaatccgataatattccgggcgtgccgggaattggcgaaaaaacg
gcattaaagttgctaaaagagtttggcacgattgaaaatatattagactcgatcgagcaa
ataagcgggaataaactgaaagaaaatttggagaaacaccgcgaccttgcccttatgagc
aaacagctggcgaccattttgcgcgacgccccgattgatctttcgttagaagatatagaa
tatcgcggatatgatgtggacaaagtgattgctttatttaaggagctcagttttaactcg
cttcttgacaaaatggcgccgcaagaagaggaaacaacagcggttgccttgccggaaatc
ggttataagattgtcgacgaggtgacggaagcaattttgtccgacgaggcggccctcgtt
gtcgaagtgttggaatccaactatcataaagcgccgattttaggctttgcgatcgcaaat
gagcatggaaacttttttattcggacagatacggcgctgtcgtcttctttgtttacaaca
tggcttgaagatgaatcaaagaaaaaaagcgtttttgacggcaagcgggcaatcgtttct
ttaaaatggcaaggagtgcatctgcgcggcattcattttgatttattaatcgcttcatat
ttgttaaatccatcccaatcgacagaagatgtcgcttccatcgcgaaaacgaagcaatat
acgggcgtccagtcggatgaagcagtgtacggaaaaggcgcgaaacaaaaaataccggat
gaacaaattttagcagaacatctcgtgcgtaaagcggcggcgatacgcgagttggaacaa
gattttattcacgatttgcagaaaaatgagcaatattctttattcacggatttggaactg
ccgctttccgccattcttgcggagatggagtttgccggtgtgaaagtcgatgtcgagcgg
ctaaaagaaatgggggaagaattgacagaacagctaaaagaagtagagcaagaaatttac
cgcttagctggccaagagttcaatattaattcgccgaaacagttaggcgtcattttattt
gaaaagctgcaactgcctgtgttgaaaaaaacgaaaacaggctattcgacatcggcggaa
gtgctagaaaagcttgcgccacaacacgaaattgtcgagaaaattttgcattaccgccaa
ttagggaaattgcaatcaacgtatatcgaagggctattaaaagtcgtgcaccgcgacacg
aacaaagtgcacacgatttttaaccaggcgcttacccagacagggcggttaagctctacg
gaaccaaatctgcaaaacatcccgattcgtttagaagaagggagaaaaatccgccaggcg
ttcgttccatcagagccggattgggtcattttttccgcggactattcgcaaatcgaactg
cgtgtacttgcccatatcgccaatgatgaaaatttgattgccgcgtttcgccacgatttg
gatattcatacgaaaacggcgatggatatttttcatgtgaacgaagatgaagtgacgccg
aacatgcgtcggcaggcaaaagcggtaaacttcggcatcgtttacggcattagcgattac
ggattatcgcaaaacttaaacattacaagaaaagaggcggctgaatttattaagcgatat
ttcgagattttcccaggggtaaagcaatatatgaaggatatcgtccaagaggcgaaacaa
aaaggctatgtgactacgattttgcatcgccgccgttatttgccggatattacaagccga
aacttcaatttgcgcagctttgcggaacgaacggcgatgaatacgccgattcaagggagc
gccgccgacattattaaaaaagcgatgatcgatttatcgaatcggctgaaacaagaaaac
atgaaagcgcgcatgttactgcaggtgcatgacgagctcattttggaagcgccgaaagaa
gaaatagaacgattgcaacaaattgtaccggaagtcatggaaaacgcggtgcaactgcgg
gtgccgcttaaagttgattatcattttgggccaacatggtatgacgcaaagtaa
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