Parageobacillus sp. KH3-4: PspKH34_10130
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Entry
PspKH34_10130 CDS
T08468
Symbol
yqeN
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg03030
DNA replication
parg03430
Mismatch repair
parg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PspKH34_10130 (yqeN)
03430 Mismatch repair
PspKH34_10130 (yqeN)
03440 Homologous recombination
PspKH34_10130 (yqeN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parg03032
]
PspKH34_10130 (yqeN)
03400 DNA repair and recombination proteins [BR:
parg03400
]
PspKH34_10130 (yqeN)
Enzymes [BR:
parg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PspKH34_10130 (yqeN)
DNA replication proteins [BR:
parg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PspKH34_10130 (yqeN)
DNA repair and recombination proteins [BR:
parg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PspKH34_10130 (yqeN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
nSTAND1
DUF6953
EntA_Immun
Motif
Other DBs
NCBI-ProteinID:
BDG46452
LinkDB
All DBs
Position
1038193..1039215
Genome browser
AA seq
340 aa
AA seq
DB search
MVVDLWGKIKNHHLSPLYLLYGTESFLLTETYELLIRTVLTEEEREFNVSVYDCEETPVQ
TALEDAETFPFLGEKRVIVVKNPYFFTAEKEKEITHDLKKLESYIMSPSPFSIVVFVGAY
EKLDERKKITKLMKEHAEVLVATPLSEKELREWMMERAQQSGATMEENAVDALLQLAGTN
LMTLANELDKLALFVGRGGIIRQETVEKLVSRTLEQNVFVLVEKVTKRQIDEALQVFYDL
LENNEEPLKILALLANQFRLLYQVKWLAAKGYGQQQIASILKVHPFRIKLAMGQAALFSE
EELMAAIRQIAEADYEMKSGAMDRQLIMELLLMKWSGKTK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtggttgacttgtggggcaaaataaaaaatcatcacctttctcccctttatttatta
tatggaacggagtcgtttttattaacggaaacgtatgaacttcttatccgcacggtgtta
accgaagaagagcgggaatttaatgtatcggtatacgattgcgaagaaactccggtgcaa
acagcgctagaggacgcagaaacgtttccgtttttaggagaaaaacgggtgatcgtggtg
aaaaatccttacttttttacagcggagaaagaaaaagaaatcacgcatgacttaaaaaag
ttggaatcgtacataatgtcgccttcccctttttcgattgtcgttttcgttggggcgtat
gaaaaactagatgaacgaaaaaaaataacgaaattaatgaaggaacatgcggaagttttg
gttgcgactccgctctccgaaaaagagctacgcgaatggatgatggaaagagctcagcaa
agcggcgcgacgatggaggaaaatgcggtcgatgctttgctgcagctggcgggaacgaat
ttaatgacgctcgctaacgaactggacaagctcgctttgttcgttggacgaggcggaata
atccgtcaagaaactgtcgaaaagctcgtatcgcgtacgttagagcaaaatgtgtttgtg
ttagtggagaaagtgacaaaacgacaaatcgatgaggcgctgcaagtattttacgatttg
ctggaaaataatgaagagccgctgaaaattttagcgctgctggccaatcaatttcgcctt
ttataccaagtgaaatggctggcagcgaaaggatacgggcagcagcaaattgcttccatc
ttaaaagtgcacccatttcggattaaacttgcgatggggcaagcggcgctgttttctgaa
gaagagcttatggcggccatccggcaaattgccgaagcggactatgaaatgaagagcgga
gcgatggatcggcagcttattatggagctattgttgatgaaatggagcggtaaaacgaaa
tga
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