Parageobacillus sp. KH3-4: PspKH34_12800
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Entry
PspKH34_12800 CDS
T08468
Symbol
ypfD
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PspKH34_12800 (ypfD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
parg03011
]
PspKH34_12800 (ypfD)
Ribosome [BR:
parg03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PspKH34_12800 (ypfD)
Bacteria
PspKH34_12800 (ypfD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
EXOSC1
RRP4_S1
RNase_II_C_S1
DUF5335
Motif
Other DBs
NCBI-ProteinID:
BDG46719
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All DBs
Position
1276949..1278112
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AA seq
387 aa
AA seq
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MTEDMNLQVNVYKVGDIVRGKVVKLEDKQVLVDIEGSKQSGIIPISELSSLHIDKTSDAV
SVGDEVTAKVKKVEEGENEEDGLLILSKKAVDAERAWEELERKFASGETFEVVVKDIVKG
GLVADVGVRGFIPASLVEPHYVEDFSDYKGKMLAVKVVELDREKNRIILSHRAVVEEEQE
RQRKEVFSRLEPGQVLEGIVRRITDFGVFVDVGGFDGLVHISQLSHTRVAHPSDVVQEGE
TVKVKVLSVDEENGRVSLSMKEAMPSPWEGIAEKIAPGDIVTGKVKRLVPFGAFVEIFPG
VEGLVHISQISNKRIGTPHEVLKEGEEVKAKVLDVNEDEHRISLSIRDLIEEEAASEEDY
SQYANLSNEVRGFQIGEVIGEQLKKLK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggatatgaatttacaagtgaacgtatacaaggtaggtgatatcgttcgcgga
aaagtggtaaagttagaagataagcaagtgcttgtcgatattgaaggaagcaaacaaagc
gggattatcccaattagcgaattatcgagtttgcatattgacaaaacaagtgacgccgtt
tctgtcggcgatgaagtgacagcgaaagtaaaaaaagtggaagaaggcgaaaatgaagaa
gatgggttgctgatcttatcaaagaaagcagtggacgctgagcgcgcttgggaagaatta
gagagaaaatttgctagcggggaaacgtttgaagtcgtcgtgaaagacatcgttaaaggc
ggactcgttgccgatgttggagtgcgcggatttatccctgcctctctcgtagagccgcac
tatgtcgaggatttttccgactacaaaggcaagatgcttgcggtcaaagtggtagagctt
gatcgtgaaaaaaatcgcatcattttgtcgcatcgtgccgtcgtggaagaagagcaagag
cgccagcgcaaggaagtatttagccgtttagagccagggcaagtgcttgagggaattgtg
cgccgcatcaccgattttggcgtgtttgtggatgttggcggctttgatggtctcgtacat
atttcccagctttcccatacgcgcgtcgcacatccgtccgatgtcgtgcaagaaggggaa
acggtgaaagtaaaagtgctttccgttgacgaggaaaacggtcgtgtctccctttctatg
aaagaagcaatgccaagcccttgggaagggattgccgaaaaaatcgctcctggcgacatc
gtcactggtaaggtgaagcggcttgtgccgttcggtgcgtttgttgaaattttcccgggt
gtcgaagggcttgttcatatttcgcaaatctccaataagcgcatcggcaccccgcatgaa
gtgctaaaagaaggggaagaagtaaaagcaaaagtgcttgatgtaaatgaggacgaacat
cgtatctcgttaagtatacgcgatttaatcgaggaagaagcggcttctgaggaagactat
agtcaatatgcaaatctgtcaaacgaagtaagaggcttccaaattggcgaagtaattggt
gagcagctgaaaaaattaaaataa
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