Parageobacillus sp. KH3-4: PspKH34_16600
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Entry
PspKH34_16600 CDS
T08468
Symbol
wapA
Name
(GenBank) tRNA nuclease WapA
Organism
parg
Parageobacillus sp. KH3-4
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
CBM96
CBM_4_9_1
Tox-URI2
RHS
TGFb_propeptide
CagY_I
Motif
Other DBs
NCBI-ProteinID:
BDG47099
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All DBs
Position
1643207..1650160
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AA seq
2317 aa
AA seq
DB search
MKSTRLKKWLVWFIVCLLAFSSIPLEGLAETIHSKVNNTAENHLPPKVPEAPKINLKPGE
IIEERTENTKVYYNGDGTFTKKIYFEPIHIKKKNQKLFEEVSSSLTDSPNNTNYVETENT
ILETNFYKKMINGEYATFHYNGYSISYSILEAAGNDVQPIKAKDVTATYKKKDNKILHKN
IFPSIDLQNITFNESTKEDLVLHSFTGYHIFKFRLKTSLHADIQDDGSILFTNKENEKVF
ELPKPFMVDSNLDEHSGEVQRSENVTYELQPDDQGYVLTVKADPEWLKDPKRVYPVYIDP
STSINVSTDTFVMSAYPTTNYSSSSSKWDSAQGQYVLKVGYYDGTTGTCYGFLNPDLSSV
KNMNVTSATFNVYVTHSYYATTPTGLWLDTVNGPWSASTLTWNNQPSSTNIGKVDVARDQ
WAQFNVTNIVKEWASGTKPNYGFKLHTNGNGQTYWKKVVSSTNSSYKPYLSVTYTIPVPD
MPTGTVFSNGDGTGYVNLSWDPVPGATGYKVWIYNGKSYEAFNVGSVTSWSTKGKKIWPT
SSEISVGRYDLHQDNLGTELSVDPSPVYRNSGGSYPNNKNYWFRVSAIFPQGESAMSEAY
MPTIPNLAKPAAPTGVSYTNGNGTGYIDFQWNPVSGATGYKIWIFNGSYYESLDVGNVTS
WTTKGKKYWPTSTEISDGRYKLHLNDSLGTELAVDPSPVYANAGTRYATSTNYWIRVSAY
NSQGETVLSDEYTPSIPDLPVPPAPSGFAYSNQLGSNSGYVMLDWEKIDGATGYKVWIFN
GLYYEAFDVGDVDHWTTQNKGIWPTPEEIQQGNSSTLTLHHDGKGLELPKDPSPMYAKMG
TRYATSTSYWFRLSAYNEKGETVFSSNALTVKIPAANEYLGKEEYWSIIDVPYGSVNAAT
GNLIIDEDDVSISGRGPELGITRTYNSLSTSVGLFGKGWHSDAEMNVVAQGNEARFTDED
GTLHIFTKLSDGTYKAPTGVYLQLSETTDEYILTTKDQTKIHFNKNDGKLTKMVDGHGNT
TTYSYSNGKLVAITDASGRKLDIQYNSNGKIQKITDPMNRTITYEYDNDRLTKVTQTGGE
VTRYEYNEQDRLEKVLEPTHTEDKPVVNQFVYSGDRLSQVIDPENHTYTLSYDPTKRQLI
MTKPNGRKTRYTFNEAANPIQIVDDLDGLNITTSYVYEGNNLKESRDPNDQHAANPTESY
TYDANGNVLTAKDSYGTETYEYNQNNDVVSMKDTEGDTTTIAYDGLNPVSETDQSGKTSS
VSKYDSYGNIIEESDTLGSATNLLSNNGFEQGTTAWTLLRSYDSGQLLEDTNVYNGLTGR
KTLNITVNSTSPSTELGYVAATQEITVKPNTTYTLSGKIKTNLTKANAFFNVQFISSQNQ
TISWADHRYSQLTGTRPWTERQFTFTTPSNAAKIRIYLEVEHKSPDASGEAWFDNVQLEE
AQVSSSYNPVLNSSFEGNVANWSGTGGSIDSTESFDGSYSLKVSRTSTTQSASEYKQTVI
VGQTSSDAPINLTLTGVSKAEDVKANGTVSPSDYSITAKVYLVDGTTETYTADFPTGTQD
WNRAAVSIQPSKPIDKIDVSAAFRGNYTGTVWFDAIRLMEGNVVMKNKYDANGNYVEEET
DEAGYVTKKKYDAVGNLVSEYDKKGNQKEYTYDASNRLKQLLLANGTSVNYDYDANGNMT
SKVIQTSGGQSQEFRYSYDKTGKLIKTVGPLNDVTTNEYDANGNKIKTVLPKGNTIQWTY
DGTERVKTISYNNVPYYEFSYDKNGNELSVKYLKDGTTKTRTFDKANRVIEQSDRGGVQK
WTYPTTSDKLQQLMFSHGSFSQTINYQYNALDQNTVVQDGTYTYRFDYDERGNVRTFTTG
NGAGSTFTYDDRGLVESVSVGTADGKEILSETYRYDENGNRAKIEYPTGETIVYHYDALD
QLVEEQLPDGTKIEYTYDGFGNRTKVVKTKDGQSTTTNADYNAANQLVRFGDETITYDAN
GNRVEDGQYRYEWNEADQLVSITRKGESTPFVTYKYDEDGRRIQKNVNGVITNYHYQGDS
LNVLYETDASGNVVQSYVYGENGQLLAMKKGSVTYFYHYNAHGDVIALTDAQGNVVARYE
YDTWGNLLSQSGDMAEENPYRYAGYQYDQETGLYYLIARYYHPTHGVFLSLDPDPGDEDD
ILTQNGYAYANNNPVMLVDLDGHYAHIVIIAGVGAYRVYKIYKVYKKYRKISKKYHSNSK
RNPAIHHGYEIYDKKTNKVVKVGISDGRISKKGKSYRAERQVRKWNKRYKTDRYASRIVK
TNIRGRYNALRWEKRHTEYINRIQPNNKLSPPFHYRP
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcactcgtttaaaaaaatggttggtatggtttatcgtttgtttgctagctttc
tcaagtattcctctagagggacttgcagaaaccattcattctaaagtcaacaatacggca
gaaaatcatttaccaccaaaagtgccagaagctcctaaaatcaacctcaagccgggggaa
atcatagaagaacggactgagaatacaaaggtttactacaatggagatggcacgtttacc
aagaagatctactttgaacctattcatattaagaaaaagaatcaaaaactgtttgaggaa
gtatcttctagcctaacggatagtcccaataatacgaactacgttgaaacagagaatacc
attttagagaccaacttttataaaaaaatgatcaatggagaatacgccacgttccattac
aatggatattcgatttcttactctattttagaggcggcaggtaatgacgtacaaccgatc
aaggcgaaggatgtgaccgccacttataagaaaaaagacaacaaaattctccataaaaac
atttttccaagcatagacctgcaaaatattacatttaacgagtcaacgaaagaagattta
gttcttcattcttttactggctatcatattttcaaattccgtctgaaaacgagtttacat
gcagacattcaagacgatggctccattttatttacaaataaagaaaatgaaaaggtgttt
gaactgccgaagccatttatggtcgactcgaatcttgatgaacactctggagaagtccaa
cgttccgaaaatgtaacgtatgaacttcaaccggatgatcaaggatatgtattaacggtc
aaagccgatccagagtggctgaaagacccgaaacgagtctatccagtatatattgatccg
agtacgtccattaatgtatcgaccgatacatttgtgatgagcgcatatccgaccaccaac
tatagttcttcatccagtaagtgggattccgcgcaaggacaatatgtgctaaaagtagga
tattatgatggaacgacagggacttgttatgggtttttgaaccctgatctctccagtgtc
aagaatatgaatgtgacaagtgccacatttaatgtctatgttactcattcgtactatgca
acgacaccaaccgggttatggctagatacagttaacggcccatggtcagcgagtacgctc
acatggaataatcaaccttcttccaccaatataggcaaagtcgatgtggcaagagaccaa
tgggcgcaatttaatgtgactaatattgtgaaagaatgggcatctgggaccaaaccgaat
tacggatttaaacttcatacgaatggtaatgggcaaacgtattggaaaaaagttgtctct
tccacgaacagtagttataaaccttacttgtctgttacgtatacgataccagttccagac
atgccgacaggaacagtgttcagtaatggagatggtacaggatatgtgaatttatcatgg
gatccggttccaggtgcaactggttacaaggtttggatctataacggaaaatcctatgaa
gcgtttaatgtaggaagtgtcacttcttggagtacaaaaggaaagaaaatttggccgact
tcttccgaaattagtgtcggaagatatgatttacatcaagataatttagggacagagctt
tctgtggacccttcccctgtctatcgaaattcaggtggaagctatccgaacaacaagaac
tactggttccgagttagtgcgattttccctcaaggcgaaagtgcgatgtctgaggcttac
atgccgactattccaaatttagccaaaccagctgctccaactggggtgagctatacaaat
ggaaatgggacaggctacattgattttcaatggaatcctgtgagtggagcgacaggatat
aaaatttggatatttaatggttcctactatgaatcgttagatgtcgggaatgtcacttca
tggacaaccaaaggaaaaaaatattggccaacatctactgagattagtgatggtagatat
aagttgcatttaaatgatagccttggcacagaattggctgtcgacccttccccggtctat
gcaaatgctgggacgagatatgcaacttctacaaactattggattcgagtaagtgcctat
aattctcaaggcgaaacggttctttcggatgagtatacgcctagtattccggatttgcca
gtgccgccagcgccttcggggtttgcttacagtaaccagttaggaagcaactcaggttat
gtcatgttagactgggagaaaatcgatggcgcaacaggatacaaagtgtggattttcaat
ggactttactatgaagcatttgatgtaggagacgttgaccattggaccacacaaaacaaa
ggaatttggccaactccggaggaaatccaacaagggaactctagtaccttaacgttacat
catgatggaaaaggattggaacttccgaaagatccttccccaatgtatgcaaaaatggga
acgagatacgcaacaagcaccagttattggttccgactcagtgcctacaacgagaaggga
gaaaccgtattttccagcaatgcattgacggtgaaaatccctgcggcgaatgaatatttg
ggtaaggaagagtactggtccatcattgatgttccgtatggcagcgtcaatgccgctacc
ggcaatctgattatagacgaagacgatgtttcgatttccggaagaggtccagagcttgga
atcacaagaacctacaatagtttatccacatcggttggattgttcggaaaaggatggcat
agcgacgcggaaatgaacgttgttgctcaaggaaatgaagcaagatttacggatgaagat
ggcacgctccatatattcactaaattatccgatggcacgtataaagccccaacaggtgtg
taccttcagttaagcgaaacaaccgatgaatatatactgacgacaaaagatcaaacgaaa
atacattttaataaaaatgacggtaaattaaccaaaatggtcgatggtcatggaaatacg
acgacatatagttattctaatggaaagttagtagcgattaccgatgcttccggcagaaaa
ttagatattcagtacaattctaatggaaaaattcagaaaatcaccgatccgatgaatcgg
acgattacgtatgagtatgacaatgatcggttaaccaaagtaacccagactggcggagaa
gtgacgagatatgaatacaatgaacaggatcggttagagaaagtattggaaccgacgcat
acggaggacaagccggttgtcaatcagttcgtgtacagtggcgacaggctcagtcaagtc
attgatcctgaaaaccacacgtatactttgagctatgatccaacgaaacggcaactgatc
atgacgaagccgaatggccgcaaaactcgatatacttttaatgaagcagcgaatcctatt
caaatcgtggatgacctagatggcttaaacattacgacaagttatgtttatgagggaaat
aatttaaaagaatcacgagatcccaatgaccaacatgcggcgaatcctactgaatcgtat
acgtatgacgccaacggaaatgtgttaacggcgaaagatagttatggtacggaaacatac
gagtataaccaaaataatgatgtcgtctccatgaaagatacggaaggcgataccaccacg
attgcctatgatggcttaaatccggtatcggaaaccgatcaatcaggaaaaacctcttct
gtgtcgaagtatgattcatacggcaatattattgaagaaagtgatacattaggcagtgcg
acgaatttactctctaataacggctttgaacagggaacgacagcttggactcttcttcgt
tcgtatgattcggggcaattactagaagatacaaatgtatataatggattgaccggacga
aaaacgttaaacatcacggtgaactcgacttcgcctagcacggaacttggctatgtggcg
gctacccaagaaatcaccgtgaaacccaatacgacctacacgttaagtgggaagatcaaa
acgaatttgacgaaagccaacgcctttttcaatgttcaattcatcagtagtcaaaatcaa
acgatttcttgggccgatcatcgttatagccaattgacaggcacaagaccgtggacagaa
cgacaatttacgtttaccactccttcaaatgcagccaaaatacgtatctatttagaggta
gagcataagtctcccgatgcttccggagaagcgtggtttgataatgttcaattagaggaa
gcgcaggtttcttcgagctataacccggtgttaaacagcagctttgaaggaaacgttgcg
aattggagtggaacaggtggaagcatagacagcacggaatcattcgatgggtcttactcc
ctcaaagtatcgagaacgagtaccacacaatcggcgagtgaatataagcagacggtgatc
gtgggacaaacgtcgagtgatgcaccaattaaccttacgcttactggggtttcgaaagct
gaagatgtcaaagccaatggcacagtgagcccaagcgattattcgattacggccaaagta
tacttggtggatggaacgaccgaaacgtataccgcggatttccctactggcacgcaagat
tggaatcgggcggcggtttcgatccaaccttccaagccaatcgataaaatcgatgtatcc
gctgccttccgcggcaattatacgggaacggtatggtttgacgcgatccggctcatggaa
ggaaacgtggtgatgaaaaacaagtacgacgccaatggcaactatgtggaggaagaaaca
gatgaagccgggtatgtcacgaaaaagaagtatgatgctgtaggaaatctagtaagcgag
tacgataagaaaggaaaccaaaaagagtacacgtatgatgcatcgaatcgtttaaaacag
ctcctattggcgaatggaacgtccgtcaactatgattatgacgcgaatggcaatatgact
tccaaagtcattcaaacgagtggcggtcagtcacaagaatttcgttattcttatgataag
acgggaaaacttattaaaaccgtcggtccgctgaatgatgtgaccaccaatgaatatgat
gccaatggaaataaaatcaaaacggtcttgccgaaaggaaacacgattcaatggacgtat
gacggaacggaacgggtcaaaacgatttcttacaacaacgttccgtattacgaatttagt
tacgataaaaacggaaatgaactttctgtaaaatacttaaaggacggcacgaccaagaca
agaacctttgataaagcaaatcgggtcatcgaacaatctgaccgtggaggggtacaaaag
tggacctatccgacgacatcggataaattacagcagttgatgttctctcatgggtccttt
agccaaacgatcaattaccaatataatgcattggatcaaaatacagtcgttcaagatgga
acgtatacgtaccgttttgactatgacgagagaggaaacgttcgcaccttcacgacagga
aacggagccggttcgacctttacgtatgatgaccgcggccttgtggaaagcgtttcggtc
ggtacggcggatggaaaagaaattttatcggaaacgtaccgttacgatgaaaatggaaac
cgggcaaaaattgagtacccaacgggagagacgatcgtttatcactacgacgcgctcgat
caactagtggaagaacagctgccagacggaacgaagatcgagtatacgtatgacggattt
ggcaaccggacgaaagtcgtgaaaacaaaggatgggcagtcgacgacgaccaatgccgat
tataatgccgccaatcaattggttcgtttcggggatgaaacaattacctacgatgcgaat
ggcaaccgcgtagaagacggccagtatcggtatgaatggaacgaagccgaccagctcgtc
tcgattacaagaaaaggcgaaagtaccccatttgtcacgtacaaatacgatgaagacggc
cgccgtattcaaaagaatgtgaatggcgttattacgaactatcattaccaaggcgatagc
ctcaacgttctgtatgaaaccgatgcgagtggaaatgtggtacaatcgtatgtatacgga
gaaaacggccagctcttggcgatgaaaaaaggcagcgtcacatacttctaccactataac
gcgcatggcgatgtcatcgccttaacggatgcgcaaggaaacgtggtcgcccgctacgaa
tacgacacatggggcaaccttctttcccaatcaggcgatatggcagaggaaaacccatat
cgttatgccggataccagtatgaccaagaaacaggtttatattacctgatcgcccgttac
taccacccaacacatggcgtgttcctatccctagatccagacccaggggatgaagatgat
attctcacgcagaacgggtatgcgtatgcgaacaacaatccggtgatgttggtggatttg
gatgggcattatgctcatattgttattatagctggagtgggggcttatagagtttataag
atttataaggtctacaagaaatatagaaagatttcaaaaaaatatcattcgaatagtaaa
agaaatcctgcgatacatcatggatatgaaatttatgataaaaaaactaataaagtagtc
aaagttggtattagtgatggaaggatttctaaaaagggaaaatcatatcgcgctgaaagg
caagttagaaagtggaataagcgatacaagacagatcggtatgcttcacgaatagtaaaa
actaacatacgtggtaggtataatgcactgagatgggaaaaaaggcatacggaatacatt
aatagaatccagcctaacaacaaattatcacctccatttcactatcgcccataa
DBGET
integrated database retrieval system