Parageobacillus sp. KH3-4: PspKH34_18010
Help
Entry
PspKH34_18010 CDS
T08468
Name
(GenBank) endopeptidase LytE
KO
K19224
peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
Organism
parg
Parageobacillus sp. KH3-4
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
parg01002
]
PspKH34_18010
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parg01011
]
PspKH34_18010
Peptidases and inhibitors [BR:
parg01002
]
Cysteine peptidases
Family C40
PspKH34_18010
Peptidoglycan biosynthesis and degradation proteins [BR:
parg01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
PspKH34_18010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM_RLK
LysM3_NFP
LysM2_NFP
DUF6950
RPN6_C_helix
Motif
Other DBs
NCBI-ProteinID:
BDG47240
LinkDB
All DBs
Position
complement(1788080..1788895)
Genome browser
AA seq
271 aa
AA seq
DB search
MKKSFILTGTIISSLLAGQTAFASSYTVQKGDTLWGISKKYNTTVETLKQMNNLTSDLIF
PGQILKVDEKKDAYIVNAGDTLSKIAKQFNTTVDALLKMNPEISNPNFIKVGQTIYLPGS
AAAPAQKQTTAVSATPAENSTKAVNASLADRVIQIGEKYLGAKYLYGASPSRTDAFDCSS
FTMRVFSEVGISLPRSSAAQSQVGTPISFNQLQKGDLVFFDTDFNGTINHVGIYAGNGQM
LNVSTSKGVSYASIGSSYWKERLVKAVRVIN
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcatttattctgacaggcacaattataagttctttattagcaggccaaact
gctttcgctagcagttataccgtccaaaaaggcgatacactttggggaatatcgaaaaaa
tacaacactactgtagaaacattaaaacaaatgaataatttaacttctgatcttattttt
cctggacaaatattaaaagttgacgaaaaaaaagatgcatatatagtgaatgctggtgat
acattaagcaaaattgcaaaacaatttaatacgactgttgatgcattattaaagatgaat
cctgaaatttccaatccaaatttcatcaaggtcggccaaaccatttatttgcctggatcg
gccgcagctcctgctcaaaaacaaacgacagcggtatctgccactcctgctgaaaacagc
acaaaagctgtgaatgcttctttggctgatcgcgtcattcaaattggagaaaaatattta
ggtgctaaatatttatatggcgctagtccatctcgcacagatgcatttgattgctcatcc
tttactatgcgggtatttagtgaagttggaatttctttacctcgcagttcagcggcacaa
tcacaagttggcacaccgatctctttcaatcagcttcaaaaaggagatctagtcttcttt
gatacagacttcaatggaacgatcaatcacgttggaatttatgcgggcaacggccaaatg
ctaaatgtttcaacttccaaaggcgtttcttatgcatcgattggctcttcttattggaaa
gaacgcttggtgaaagcagtacgtgtaatcaattaa
DBGET
integrated database retrieval system
