Parageobacillus sp. KH3-4: PspKH34_22790
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Entry
PspKH34_22790 CDS
T08468
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
parg
Parageobacillus sp. KH3-4
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parg03000
]
PspKH34_22790
Transcription factors [BR:
parg03000
]
Prokaryotic type
Helix-turn-helix
Other families
PspKH34_22790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_5
Mg_chelatase
AAA_2
PAS_9
PAS_4
AAA
MCM
HTH_28
PAS_8
HTH_23
HTH_30
HTH_29
HTH_50
PAS
IclR
AAA_22
AAA_3
HTH_7
AAA_16
HTH_1
PAS_7
Diacid_rec
RWP-RK
nSTAND3
AAA_7
HTH_psq
HTH_22
DUF815
HTH_AraC
DUF1492
HTH_17
Xre-like-HTH
3H
Motif
Other DBs
NCBI-ProteinID:
BDG47718
LinkDB
All DBs
Position
complement(2282054..2283982)
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AA seq
642 aa
AA seq
DB search
MNSRREDVKEMWKRFIFKNELDERLSPIVKDSWIRSKKWKVDPFRPYGCIKTIEMEQYQY
LIDLSIPLMEGLYSIVKGSGFLVILCNEKGQLLKSIGDLDTLEMAAQIGFVEGADWSEQT
MGTNAIGTSIAIDQPVQIFAEEHYSQICQSWTCSAAPIHDSKGSIIGVLNVSGPYEKVHP
HTLGMVVSAVKAIEYQLKLNENTEKNIMMQRFLEATTNNMKEGILIIDTEGNIIKANDQL
KRLLCLDQPHLEGKRINEIFANQSIASNRPVYLQNKELHLKVKPSRNIHHVMVDKIPIYK
DNHWIGSMIMLREIEKVRQFVNHLSGNQAKITFNDIIGQHPHFIQKLNEAKLAAATDSNV
LIMGESGTGKEMLAQAIHNASKRRNKPFIAINCGGIPRDLLGSELFGYVEGAFTGAKKGG
SAGKFELADGGTLFLDEIGEMSLEMQVLLLRVIQEKEVMRIGGHKVIPVDVRIIAATNKN
LREEVQKGSFREDLFFRLHVMPITLPPLRERKEDIPLLVHHFISKLCKKLNKPFPEIRPD
FLQALMQYDWPGNIRELQNILERTLNRNTNSILSANDLPEEMFQMFPSLKKEEMSVHRDD
IKKQSIIQALRLCNGNISKAAKHLGISRSTFYRQMRKFNIAY
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtcggcgtgaggatgtcaaagaaatgtggaagcgctttatttttaaaaatgaa
ctagacgaaaggctttcccccattgtcaaagactcatggattcgctcaaaaaaatggaag
gtagatcctttccggccatatggctgtataaaaacaatagaaatggaacaatatcaatac
cttattgatttatcgataccgttaatggaagggctttattccatcgtaaagggatctgga
tttttagttattctttgcaatgaaaaaggacagctgttaaaatcaatcggcgatctggat
acactggaaatggccgcgcaaatcggctttgtcgagggggcggattggagcgaacaaacc
atgggcaccaacgcgattggcacgtccattgcgattgatcagcctgtacaaatatttgct
gaggaacattattcgcaaatatgccaatcatggacttgttccgcagccccgattcatgat
tccaaaggcagcatcatcggagtgttaaatgtatccggaccatatgaaaaagtgcatcct
catacgttgggcatggtggtgtccgcggtcaaagccatcgaatatcaattgaaattgaat
gaaaacacggaaaaaaatattatgatgcaaaggtttcttgaagcgacaaccaataatatg
aaagaaggcatcctcattattgacacagaaggaaacattataaaggcgaacgatcagctg
aagaggcttctttgtcttgatcagccgcatctcgaaggaaaaaggatcaacgaaattttt
gcaaatcaatcgattgcttccaataggcctgtctatctgcaaaacaaggaactccattta
aaagtgaaaccatcaagaaacatccatcatgtcatggtcgataaaatccccatctataaa
gacaaccattggatcggttcgatgattatgctgagagaaattgaaaaagtgcgccaattc
gtcaatcacttatcagggaaccaagcaaaaataacgtttaatgatattatcgggcagcat
cctcattttattcaaaaactgaatgaagccaaactggcagcagcgaccgactccaatgtt
ttgatcatgggggaaagcggaacgggaaaagaaatgcttgcgcaagcgattcataatgca
agcaagagaagaaacaaaccgtttattgccatcaattgcggcggaatccctcgcgatctt
ctcggcagcgaactgtttggctatgtcgaaggcgcctttaccggagccaaaaaaggcgga
agcgcggggaaattcgaacttgctgatggcggcactctctttttagatgaaattggcgaa
atgtctttggaaatgcaggtccttcttttgcgtgtcattcaggaaaaagaagtgatgcgg
atcggcggccataaagtgataccggtagatgtccgcattattgcggcgacgaacaaaaac
ctccgcgaggaagtgcaaaaaggaagcttcagggaagatctgttctttcgcctccatgtt
atgccgatcactttgccgcctttgcgggaaagaaaggaagatataccgcttcttgtccat
cactttatcagcaaactttgcaaaaagctaaataagccgtttccagaaatccgaccagac
tttctccaagctctcatgcagtacgactggcccgggaatattcgggaattgcaaaatata
ctagaaagaacgttaaaccgaaatacgaactccattttatccgcaaacgatttgccggaa
gaaatgtttcaaatgtttccaagtttgaaaaaagaggagatgtcggtgcatagagacgat
attaaaaaacagtccattattcaggcattacgtttatgcaacgggaatatttccaaagcg
gccaagcatttaggaatttccagaagcactttttatcggcaaatgagaaaatttaacatc
gcttattaa
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