Parageobacillus sp. KH3-4: PspKH34_25250
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Entry
PspKH34_25250 CDS
T08468
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PspKH34_25250 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parg03400
]
PspKH34_25250 (mutS)
DNA repair and recombination proteins [BR:
parg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PspKH34_25250 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
nSTAND_NTPase5
nSTAND3
NACHT
AAA_27
Lumazine_bd_2
Rad17
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BDG47964
LinkDB
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Position
complement(2537241..2539832)
Genome browser
AA seq
863 aa
AA seq
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MAKYTPMIQQYLDIKAQYPDAFLFFRLGDFYEMFFDDAIKAAQELEITLTSRDGGGEERV
PMCGVPYHSAQGYIEQLISKGYKVAICEQVEDPKTAKGVVRREVVQLITPGTVMEGKGLL
EKENNYLATVTMFADGTYGFAYTDLSTGENRITILASFEDVMNELYAIGTKEIVLASDFP
SDEQQLLKERYGVTISYEDGTEMPEGFAAIASGLAQDKLQITFARLLHYIIRTQKRRLDH
MQPVQVYQVDHYMKIDLYSKRNLELTETIRSKGRKGSLLWLLDETVTAMGGRLLKQWLDR
PLLDRGQIERRLHMVETLIHHYFERQELRERLREVYDVERLAGRVAYGNVNARDLIQLKK
SLQQIPALKDIVANLSDDEAQQLADKLDPCSELVDLLERSIQENPPLSVKEGNIIKDGYN
ETLDRFRDASRNGKSWIAQLESKERELTGIKSLKIGYNRVFGYYIEVTKPNLHLLPKGRY
ERKQTLANAERFITQELKEKEALILEAEEKSIELEYELFVDIRERVKQYIPRLQSLAKAI
SELDVLQSFATVSEERHYVKPQFSDHRELVIQAGRHPVVEKVLGAQTYVPNDCYMNKERE
LLLITGPNMSGKSTYMRQIALTAIMAQIGCFVPADKAVLPIFDQVFTRIGAADDLVSGQS
TFMVEMLEARNAIVHATQNSLILFDEIGRGTSTYDGMALAQAIIEYIHDHIGAKTLFSTH
YHELTDLEQSLPKLKNVHVSAIEENGKVVFLHKIEEGPADQSYGIHVAELAGLPSSLIQR
AQEILAELEQQEQRKEEKEEPSGKNEAAFEQLSMFAEEKPSKEESRLSKKEKKALEALRS
VNLLEMTPLEALNKLYEIQKLLK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatacgccaatgattcagcaatatttggacattaaggcacaatatccagat
gcctttttattttttcgtcttggtgatttttatgaaatgttttttgatgacgccatcaaa
gcggcgcaggaactggaaattacgttgacaagccgcgatggcggcggcgaagagcgggtg
ccgatgtgcggtgttccatatcattcagcgcaagggtatattgaacagttgatttcaaaa
ggatataaagtggcgatttgcgagcaagtcgaagatccgaagacagcaaaaggcgttgtc
cgccgcgaagtcgtccagctcattactcctggtacggtgatggagggaaaagggcttctt
gaaaaggaaaacaactatttggcgacggtgaccatgtttgctgacggcacgtacggtttt
gcatatacggatttatcaacgggggaaaatcgcatcacgattcttgcctcctttgaagac
gtgatgaacgaactgtatgcgattgggacaaaagaaattgtccttgccagcgattttcca
agcgacgagcaacagctattgaaagaacgatatggggtgacgatctcgtacgaagacgga
acggaaatgccggaagggtttgcggcgattgccagcgggcttgcacaggacaagctgcaa
atcacgtttgcccgcctccttcattacattattcgtacgcaaaagcggcgccttgatcat
atgcagcccgttcaagtgtatcaagttgaccactatatgaaaatcgatttgtattcgaag
cggaatttggaattaaccgagacgatccgttcaaaagggcggaaaggctcgctcttgtgg
ctgcttgatgaaacggtgacggcgatgggcggacgattgctgaagcaatggctcgaccgc
ccgcttttggaccgcggacaaattgaacggcgcttgcatatggttgaaacattgattcat
cactatttcgagcgccaagagctgcgcgaacgcctccgtgaagtgtacgacgtcgagcgc
ctcgccggccgtgtcgcctacggaaacgtaaacgcgcgcgatttaattcagctcaaaaaa
tcgcttcagcaaattcctgcgctaaaagatattgtcgcaaatctttccgatgacgaagcg
cagcagcttgccgacaaactcgacccatgttcggagcttgtcgatctgttggagcggtcg
attcaagaaaatccgccgttatccgtaaaagaaggcaacatcattaaagacgggtataat
gagacgctcgaccgtttccgcgatgcaagccgcaacggaaaatcgtggattgcccagttg
gaaagcaaagaacgagaactaaccggaattaaatcgttgaaaatcggttataatcgcgtg
ttcggctattacattgaggtgacaaagccgaatcttcatttattgccgaaagggcgctat
gagcggaaacagacgcttgccaacgccgagcgttttattacccaggaattaaaagaaaaa
gaagcgcttattttagaagcggaagaaaaaagcattgaactagaatatgaattgtttgtc
gacattcgcgaacgagtcaaacaatatattccgcgtctgcaatcgttggcgaaagcaatc
agcgagcttgatgtcttgcagtcgtttgcgaccgtcagcgaagagcgccattatgtgaaa
ccgcagttttccgatcatcgggagcttgtcattcaagcgggccgccatcctgtagtggaa
aaagtgcttggggcgcaaacatatgtgccgaacgattgttatatgaataaagaacgggaa
ctgttgttgattacggggccgaatatgtccggaaaaagcacgtatatgcggcaaattgcc
cttactgccatcatggcgcaaatcggctgttttgtaccagcagataaagcagtgctcccg
atttttgatcaagtgtttacgagaatcggcgctgccgatgatttagtgtcggggcaaagc
acatttatggtcgaaatgctcgaagcgcgcaatgcgatcgttcacgcaacgcaaaacagc
ctcattttgttcgatgaaatcgggcgcggcacgtctacgtacgatgggatggcgctggcg
caagcgatcatcgaatacattcatgaccatattggcgcgaaaacgttgtttagcacacat
tatcacgaattaacggatctggagcaatcgcttccgaaactgaaaaacgtccatgtgagc
gccatcgaggaaaacggaaaagtcgtgtttctccacaaaattgaagaagggccggccgac
caaagctatggtattcacgtcgccgagcttgccggccttccttcctccctcattcaacgc
gctcaagaaattttggcggagcttgagcagcaagagcagcggaaagaagaaaaagaagag
ccgagcggcaagaacgaagcggcctttgaacaactaagcatgtttgccgaagaaaagcct
tccaaagaagaatcccgtctatcgaaaaaggaaaaaaaggcgctcgaggcgctaaggtcc
gtcaatttattggaaatgacaccgcttgaagcgttaaataaattatacgaaattcaaaaa
ctattaaagtaa
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