Parageobacillus sp. KH3-4: PspKH34_26610
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Entry
PspKH34_26610 CDS
T08468
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PspKH34_26610 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parg03400
]
PspKH34_26610 (priA)
Enzymes [BR:
parg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PspKH34_26610 (priA)
DNA repair and recombination proteins [BR:
parg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PspKH34_26610 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
ATPase_2
AAA_30
AAA_19
nSTAND_NTPase5
Zn_ribbon_6
AAA_16
ADDB_N
T2SSE
TrwB_AAD_bind
Zot
AAA_22
IBR_1
TMP_3
zf-C2H2_FBX41
nSTAND6
Zn_ribbon_RPB9
nSTAND3
HTH_Mga
HypA
Motif
Other DBs
NCBI-ProteinID:
BDG48100
LinkDB
All DBs
Position
complement(2676908..2679322)
Genome browser
AA seq
804 aa
AA seq
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MKVAEVIVDVPARQTDRPFDYAIPEKWEDILQPGMRVTVPFGPRRLQGFVIHIKSHSNVK
TLKPIEAVLDVTPVLNEELLELGKYLTETTLCFAISAYQAMLPAALKAKYEKEIRLVREE
NRALLPETIQPLFKDRTTVDWKEVEHSDWLRPLQKAIQQGYLEVVYHVKEKAAAKTVKYV
ELVQSHEEIGRAMNALPANAAKQKQLLTVLLSANEAMPLKQLLEQTGASYASLKSLVAKG
LIAEKEIEVYRDPYEHRSFPKTAPLSLTDEQEKALSSIIECVRANEHGVFLLYGVTGSGK
TEVYMQAIEEVLRQGKEAIVLVPEISLTPQMVKRFKGRFGSQVAVLHSGLSVGEKYDEWR
KIHRKEVQLVVGARSAIFAPFENLGMIIIDEEHETSYKQEENPRYHARDVAIYRARVHGC
PVVLGSATPSLESFARAKKGVYQLLTLPKRISDNGMPDVHIVDMREELRSGNRSMFSRAL
FEKLKDRLHKGEQSVLFLNRRGYSTFVMCRGCGYVIRCPHCDISLTYHRAGQRLKCHYCG
YEEPITYRCPSCGSEHIRFFGTGTQKVEEELTKLLPEARVIRMDVDTTSRKGAHERLLAE
FGEGKADILLGTQMIAKGLDFPKVTLVGVLAADTTLHLPDFRASEKTFQLLTQVSGRAGR
HELPGEVVIQTYTPEHYSIALAAKHDYDTFYQREMALRKMYGYPPFYYLTLITVSHPEIT
KAVAVTDKIAAYLRAQLSNEAIILGPVASPIARLHDRYRYQCMIKYKREPNMTSALKAVI
DRYQHDVSQGDLLITIDTNPYTMM
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagcagaggtaattgttgatgttcctgcgcgtcagacggaccgtcctttcgat
tatgcgattccggaaaaatgggaagatatattgcaaccaggaatgcgcgtcaccgttccg
ttcggtccgcggcgattgcaaggatttgttattcatattaagtcgcattccaatgtaaaa
acgttgaaaccgatcgaagcggtcttagacgtaactcccgtattaaacgaagagctgctt
gagctcgggaaatatttaacggaaacaacgctttgttttgcgatttccgcttatcaggcg
atgcttccagcggcattgaaagcaaaatacgaaaaggaaattcgactcgttcgcgaagaa
aaccgtgctttgctgccagaaacgattcaaccgctttttaaggaccgtactacggtcgat
tggaaagaagtagagcatagcgattggctacggccgttgcaaaaggcgattcaacaaggc
tatttggaagtcgtgtatcatgtaaaagaaaaagcggcggcaaaaacggtgaaatatgtg
gaattggtgcaatcgcacgaagaaattgggcgtgcgatgaatgcattgccggcgaatgcc
gccaagcaaaaacagttattaacggttcttctgtcagcaaacgaagcgatgccattaaag
cagctgttggagcagacgggagcttcctatgcttcgctcaaatcgttagttgccaaagga
cttattgcggaaaaagaaatcgaagtatatcgcgacccgtacgagcaccgttcatttcca
aaaacggccccgctttcgcttaccgatgagcaagaaaaagcgctttcttccatcatcgag
tgcgtgcgcgccaatgaacatggggtatttttgctatacggcgtgacgggcagcggaaaa
acagaagtttatatgcaagcgatcgaagaagtattgcggcaaggaaaagaagcgattgtt
ctcgttccagaaatttcgctgacgccgcagatggtcaaacggtttaaagggcgcttcggt
tcgcaagtggcagtgcttcatagcggtttatccgtcggagaaaaatacgacgaatggcga
aaaattcatcgaaaagaagtgcagcttgtcgtcggcgcccgttcggcgatttttgctccg
tttgaaaatctcggcatgattatcattgacgaagaacatgagacaagctacaagcaagaa
gaaaatccgcgctatcacgcccgcgatgtggcgatttaccgcgcccgtgtccacggctgc
cctgtcgtgctcggcagcgccactccttcgcttgaatcgtttgcacgggcgaaaaaaggg
gtatatcagttactgacattgccaaaacggataagcgataacgggatgccggacgttcat
attgtcgatatgcgggaagaactgcggagcggaaaccgttcgatgttttcgcgagcgtta
tttgagaaattgaaagaccgcctccataaaggggaacagtctgtgttgtttttaaatcgg
cgtggctattcgacatttgtcatgtgccgtggttgcggctatgtgattcgttgcccgcat
tgcgatatttcattaacgtaccatcgtgccggacagaggttaaaatgccattattgcgga
tacgaagaaccgattacgtaccgctgtccatcatgtggaagcgaacatattcgctttttc
ggaacagggacgcaaaaagtggaagaagaattgacgaaactgcttcctgaagcgcgcgtg
atccgcatggatgtcgatacgacgagccgcaaaggcgcccacgaacgtctgcttgccgag
tttggtgaagggaaggccgatattttgcttggcacgcaaatgattgcgaaaggccttgat
tttccgaaagtaacgcttgtcggcgtgcttgctgccgatacgacgctccatcttcctgat
ttccgcgcttccgaaaaaacgtttcagctgctgacgcaagtaagcgggcgcgccgggcgc
cacgagcttcctggagaagtcgtcatccaaacgtatacgccggagcattacagcatcgcg
cttgccgcgaagcacgattatgacacgttttatcaacgggaaatggcgcttcgcaaaatg
tacggctacccgccgttttactatttgacattaatcaccgtatctcacccggaaataacg
aaagcggtggccgtgacggataaaattgcggcatatttgcgggcgcagctgtcaaacgaa
gcgatcattctcggtcctgtcgcttcgccgattgctcgccttcatgatagatatcgctac
caatgcatgataaaatacaaacgggagccgaacatgacgagtgcattaaaagcggtcatc
gatcgctatcagcacgacgtttcccaaggggatttattgattacgatcgatacgaaccca
tatacgatgatgtaa
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