Parageobacillus sp. KH3-4: PspKH34_27050
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Entry
PspKH34_27050 CDS
T08468
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg00550
Peptidoglycan biosynthesis
parg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PspKH34_27050 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parg01011
]
PspKH34_27050 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
parg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PspKH34_27050 (spoVD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
YycC
Motif
Other DBs
NCBI-ProteinID:
BDG48144
LinkDB
All DBs
Position
complement(2723440..2725374)
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AA seq
644 aa
AA seq
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MRASHVTVRKRLMIVFLVGVLIFAIIDIRLGYVQLLIGDMLTERAKDSWSRNIPFEPKRG
EILDRNGVPLATNMSAPTVYVIPRQIENPVETAEKLAKVLNMPVEKAYKRITKKTSIERI
PEGRKISNEKAKEIRALGLKGVYIAEDTKRYYPFGSYLSHVLGFTGIDNQGLTGLELYYD
KELSGQRGSVQFYSDAKGKRMPNMTDEYTPPTDGLDLMLTIDSRIQTIVERELDIAEAKY
NPDGIIAIAMNPNTGEILAMASRPTFDPANYRNVPPEIYNRNLPVWSTYEPGSTFKIITL
AAALEEKKVDLLKDHFYDPGYVKVAGATLRCWKKGGHGSQTFLEVVQNSCNPGFVELGER
LGKEKLFYYIKQFGFGEKTGIDLQGEGTGILFDLKRVGPVEQATTAFGQGVSVTPIQQVA
AVSAAVNGGILYTPYIAKQWVDPETGKVVIRNTPKAKRRVISEETSKQVRYALESVVAQG
TGKGAYVEGYRVGGKTGTAQKAKDGRYLKDNHIVSFIGFAPADDPQLVVYVAVDNPKGTV
QFGGVVSAPIVGKIMEDSLRVLGVKPRKDQIEKEREWNDPKMIEVPDLIGLSKKDLQEQL
FNLKLDVSGEGDVVIEQAPKPGVKVKEGSTIRIYLAAKAEKEGE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcttctcacgtcactgtccgcaaacggctgatgatcgtgtttctcgttggagtg
ctcatttttgccattattgacattcgcctcggatatgttcaattgctgataggggatatg
ttaacggaacgggcgaaagattcatggagcagaaacattccgtttgaaccgaaacgaggg
gaaattttggaccgcaacggcgttccgctcgccacaaacatgagcgctccaaccgtatac
gtcattccgcgccaaattgaaaacccggtggaaacagcggaaaaattggcgaaagtatta
aatatgcccgtggaaaaggcgtacaaacgcattacgaaaaaaacctccatcgaacgcatt
ccggaagggcgaaaaatatcgaatgaaaaagcaaaagaaattcgggcgctcggcctaaaa
ggggtatatatcgcggaagatacaaaacgttattatccgttcggtagttatttgtcacac
gtcttaggatttaccggcatcgataatcaaggtttgacggggctggagctttactacgat
aaggaattgagcggccagcgcggttcggtgcaattttattcggatgcgaaaggaaaaaga
atgccgaatatgacggacgaatatacgccaccgacagacggattagatttgatgcttacg
attgattcgcgcatccaaacgatcgtggagcgggagcttgatattgccgaagcaaagtac
aatccagacggcataattgcgatcgcaatgaacccgaatacgggagaaattttggcgatg
gcgagccgcccgacgtttgacccggcaaattatcggaatgtgccgccggaaatctacaat
cgtaacttgccggtttggagcacgtatgagcctggttcgacgtttaaaattatcacgctt
gccgcagcgttggaagaaaaaaaagtcgacttattgaaagatcatttttatgatccagga
tatgtaaaagtggccggtgctacgttgcgctgctggaaaaaaggcgggcatggatcgcaa
acctttttagaagttgtgcaaaattcgtgcaatccgggttttgtcgagctcggggagcgg
cttggaaaagaaaagctattttattatataaaacagttcggctttggtgaaaaaacagga
attgatctgcaaggggaaggaaccggaattttatttgatttgaaacgtgttgggcctgtt
gaacaagcgacaacggccttcggtcaaggggtgtcggtgacgccgattcagcaggttgcc
gctgtttctgcggcggtcaatggcggaattttgtatacgccatatatcgcgaaacaatgg
gttgaccctgagacaggaaaggtggtaatccgcaatacgccaaaggcgaagcgtcgcgtt
atttccgaggaaacgtccaaacaagttcgctatgctctagagagcgtcgttgctcaagga
acaggaaaaggtgcctatgtcgaagggtatcgcgtcggcggaaaaacgggaacggcgcaa
aaagcgaaagatggccgatatttaaaagacaaccatatcgtttcatttatcggctttgct
ccggcggatgacccgcagcttgttgtttatgttgctgtcgacaatccgaaaggaacggtg
cagtttggcggcgtcgtctccgccccaatcgttggaaaaattatggaagacagtttgcgc
gtgcttggcgtcaaaccaaggaaagatcaaatagaaaaagagagagaatggaatgatccg
aaaatgatcgaagtgccggatttaatcggcttatcgaaaaaagacttgcaagagcaactt
tttaacttaaaattagatgttagtggagaaggtgacgttgttattgagcaagctccaaaa
cctggagtgaaagtaaaagaaggttcgaccattcgcatttatttagcagcaaaggcagag
aaagaaggcgaataa
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