KEGG   Parageobacillus sp. KH3-4: PspKH34_30500
Entry
PspKH34_30500     CDS       T08468                                 
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
parg  Parageobacillus sp. KH3-4
Brite
KEGG Orthology (KO) [BR:parg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:parg03400]
    PspKH34_30500 (sbcC)
DNA repair and recombination proteins [BR:parg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PspKH34_30500 (sbcC)
    Archaeal homologous recombinant proteins
     PspKH34_30500 (sbcC)
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_21 NPV_P10
Other DBs
NCBI-ProteinID: BDG48489
LinkDB
Position
complement(3050811..3054161)
AA seq 1116 aa
MKPISLTIAGLHSFREKQTIDFQSLCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAP
NNTHGIMNHAENELFVSFTFELENASCTKRYTVERSFKRGDEWRLKSGICRLIEVGAENV
VLADKWTEVNKAVEQLLGLTMKDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFHLEPYG
DKLNKKLKEKLAAISSELNEVIAEKAGLGDASKEALERAKQELDMLWELLKKRQAELHDM
EVKIERNKQLWAWQKEKETLEAELVRFSMEEPHIRALENKKERAEQAERMWPYLERYEEA
RRLVANAQQKQHELRQKLAQAEALHEKAMRHYERIRQEKAASEPRLLAKKEQLTQAQQLA
AQIRSLEAELNEMEKQIRQVEEEERQKREQWQEAAALYERGLEKQQMLKTELQKHLASIE
QKEVIERAYDEKQQIERIADALQHIQQRLEQKQQAQQQANEEAEKRKRQAEAAKEKLHFL
FQKIEKIYHSVCERQWQLEKLMYRYEQQLEQEREKVEQAKTAEMAATLAKQLRQGEPCPV
CGSREHPNPYVYKHHDSDSGKIAMFEQQVKHGQSYMQMLHALKAQLEQLAQFIGNEWAFQ
RFDVSKWKVEEDIDIAVEVKALQQDCLQLKEAVQQALQKWRDAESSQQAIEQERRVLEKD
IRELQTEWQLRLDEYNRLQASWREKYADFSFTEIEVIRNQMRKREEIVRQLQKRIDDSIP
FLDNKLSEKERLAQQLREIETEKVRLVSLYRAKQQQIDSYRQQLLERAGTAQMEEQLLQI
EQQLLRLKKEEEQAYQRWLQAQKQHQTLEAEAKAIQQSLEEGKAQYEEAKSRWLQELKKT
AFADENEVKEAKVAAEKRFEWEQQIKDYWQKVQHAQHRLGQLAEAMGGETVDQQQWEQLQ
AVYEEVKQQVDSTMQQVGAAQNKVEELTEKHKRFAELEKKQQELTALVDRYKHLQSILKG
NSFVEFLAEEQLIQVTRMASERLSSLTRQRYSLEVDSQGGFLIRDDANGGVKRPVTTLSG
GETFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLDTVISALEKLHSQRLSV
GVISHVQEIRARLPKRLIVEPAEPSGRGTRVKLEVM
NT seq 3351 nt   +upstreamnt  +downstreamnt
gtgaagccgatttcgttaacgatagctggtttgcacagtttccgcgaaaaacaaacgatt
gatttccaatcgttatgcgaaggcggcgtcttcggcattttcggtccgacgggaagcgga
aaatcaacgattttagacgcgatgacacttgcgttgtttggcagcgtggaacgcgcgcca
aacaacacgcatgggattatgaatcacgcggaaaatgagctgttcgtttcttttacattt
gaattagaaaacgcttcatgcacgaagcgctatacggtggagcgcagctttaaacgcggc
gatgaatggcggttaaaaagcggaatatgccggcttatcgaagttggcgcagaaaatgtt
gtgctggctgataaatggacagaagtcaataaagcggtggagcaattgctaggtttgacg
atgaaggattttacgcgcgctgtcgtgttgccacaaggaaaattcgccgaatttttgtca
ttgaaaggtgccgaacgtcggcaaatgctacagcgcctttttcatttggagccgtatggc
gataagttaaacaaaaaattaaaagagaaacttgccgccatttctagtgaattaaatgag
gtgatcgctgagaaggcggggctgggagatgcctcgaaagaagcgctcgaacgggcaaaa
caagaattggacatgctttgggagttattaaaaaaacggcaagcagaattgcatgatatg
gaagtgaaaatagaacgaaataaacagctatgggcttggcaaaaggaaaaagaaacgctt
gaagcggaactggtgcgtttttctatggaagaaccgcatattcgcgcattggaaaataaa
aaagaacgcgcggaacaagcggaacgaatgtggccatatctcgaacggtatgaggaagcg
cgccgattggttgccaatgcgcagcagaagcagcacgaattgcggcaaaagctcgcacag
gctgaagcgttgcatgaaaaagcgatgcgccattatgaacgcattcgccaggaaaaagcc
gcttctgaacctcgcttgttggcaaaaaaagaacagctaacccaagcacaacagctggcg
gcgcaaatccgttcgcttgaagcggaactaaatgaaatggaaaaacaaattcgccaggtg
gaagaggaagaacggcaaaaacgcgagcagtggcaggaagcggcagcgctatatgaacgc
gggctcgaaaaacaacagatgctgaaaacagagctgcaaaagcatttagcttcaatagag
cagaaggaagtgattgaacgggcatacgatgaaaaacagcaaatcgaaagaatagcagat
gcgctccaacatattcagcagcggctggaacaaaaacagcaagcgcagcagcaagcaaac
gaagaagcggaaaaacggaaacggcaagcagaagcggcaaaagaaaaattgcactttttg
tttcaaaagatagaaaaaatctatcattctgtttgtgaacggcaatggcagctagaaaaa
ctaatgtatcggtacgaacaacaactggaacaagaacgagaaaaagtggaacaggcgaaa
actgcggagatggcggcgactcttgccaaacagcttcgccagggggaaccgtgccctgtt
tgcgggtcgcgtgagcatccgaatccgtatgtatataagcaccatgatagcgacagcggg
aaaatcgctatgtttgagcagcaggtcaaacatgggcaatcttatatgcaaatgctgcac
gcgttaaaagcgcagcttgagcaactagcgcaattcatcggaaatgagtgggcgtttcaa
cgttttgacgtaagtaaatggaaagtggaagaagatatcgatattgccgtggaagtaaag
gcacttcaacaagattgtttacagttaaaagaagccgttcagcaggcgctgcaaaaatgg
cgtgacgccgaatcgtcgcaacaagcgatcgaacaagaaaggagagtgctagagaaagat
atacgagagttgcaaacggaatggcagcttcgtttggatgaatacaatcgattgcaagca
agctggcgcgaaaaatatgccgacttttcttttacggagatcgaagtgatccgcaatcaa
atgcgaaaacgcgaagaaatcgtccggcaattgcaaaaacggatcgatgacagcatcccg
tttctcgacaataaattaagcgaaaaagaacggttggcccaacaactgcgggagatagaa
acggaaaaagttcgcctcgtttcgttgtacagggctaaacagcagcagatcgacagctat
aggcaacagctgttggaaagagcgggaacagcgcaaatggaagagcaacttctgcaaata
gagcagcagctgcttcgtttaaaaaaagaggaagaacaagcctatcaaagatggcttcag
gcgcaaaaacagcatcaaacgttggaagcggaggcgaaagcgatacagcagtcattggaa
gaaggaaaagcgcaatatgaggaagcgaaatcgcgttggcttcaggaattgaaaaaaacg
gcgtttgccgacgaaaacgaagtgaaagaagcaaaggtagcagcggaaaaacgattcgag
tgggaacagcaaatcaaagattattggcagaaagtgcaacatgctcagcatcgcctcggg
cagcttgccgaagcgatgggcggggaaacggttgatcaacaacaatgggagcaattgcag
gctgtatacgaagaagtgaaacaacaggtagacagcacgatgcagcaagtaggcgccgcg
caaaacaaagtggaagaattaacggaaaaacataagcgttttgccgaattagagaaaaaa
cagcaagagctgaccgctcttgtcgaccgttataaacatttgcagtcgattttaaaagga
aacagctttgtcgaatttttggcggaagaacagcttattcaagtgacgaggatggcttcc
gaacgattaagttcgttgacgagacagcgctattcgttggaagtcgactcgcaaggagga
tttctcattcgcgatgacgccaatggcggggtaaagcgtccggtgacaacattatcaggt
ggagaaacgtttttaacgtcattatcgcttgcattggcgttgtcggcgcaaattcaattg
cgcggcgaatatccgctccggtttttcttcttggacgaagggtttggcacgttggatgcg
gaacttcttgataccgttatttctgcacttgaaaaacttcattcgcagcggctgtctgtc
ggagtgatcagccatgtgcaagaaattcgcgctcgcttgccgaaacggctcattgttgag
ccggcggaaccgtctgggcggggaacacgagttaaattagaagttatgtaa

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